Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., ATP-dependent RNA helicase RhlE from Erwinia tracheiphila SCR3

 Score =  263 bits (671), Expect = 1e-74
 Identities = 145/380 (38%), Positives = 230/380 (60%), Gaps = 5/380 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL+  +L+ +    + Q T IQ QAIP+ +AGRDL+AS++TG+GKT  F LP+L
Sbjct: 1   MSFDSLGLNADILRAVTEQGYNQPTPIQLQAIPVVLAGRDLMASAQTGTGKTAGFTLPLL 60

Query: 65  HK--SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122
            +  S ++     +  R LIL PTRELA QV   ++     L+  + ++ GG + N Q+ 
Sbjct: 61  QRLSSTESNQKGRRPVRALILTPTRELAAQVGENVQDYSKYLNLRSLVVFGGVSINPQMM 120

Query: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182
            L  G   ++ATPGRL D     +L L  +E LVLDEADRMLD+GF  ++RR+  A    
Sbjct: 121 KLRGGVDVLIATPGRLLDLEHQNALDLSKVEILVLDEADRMLDMGFIHDIRRVL-AKLPA 179

Query: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242
           +RQ L+FSAT    ++  +A +LL+ P+++ +   +   + +TQH +  D    K  LL 
Sbjct: 180 KRQNLLFSATFSD-EIKTLAEKLLHNPEQVEVARRNTASEQVTQHVHFVDK-KRKRELLS 237

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
            ++    ++QV++FT T+   + L E+LN++ + A A+ GN +Q  R   +  F+ +  +
Sbjct: 238 LMIGRDNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALSDFKDSKIR 297

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           +LV TD+A+RG+DI  + HV+N+++P   E+YVHR+GRTGRA   G+A+SLV   + +  
Sbjct: 298 VLVATDIAARGIDISELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357

Query: 363 KRVEAFLQQEIQFEVLAGLE 382
           + +E  L++EI    L G E
Sbjct: 358 RDIERLLKREIPRIALEGFE 377