Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

 Score =  268 bits (684), Expect = 4e-76
 Identities = 144/371 (38%), Positives = 228/371 (61%), Gaps = 5/371 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL+  +L+ +A   + + T IQQQAIP  + GRDL+AS++TG+GKT  F LP+L
Sbjct: 1   MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 65  HKSLKTK--AFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122
              +K +  A   +  R LIL PTRELA Q+   +R     L+  + ++ GG + N Q+ 
Sbjct: 61  ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM 120

Query: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182
            L  G   ++ATPGRL D     ++ L+G+E LVLDEADRMLD+GF  ++RR+  A    
Sbjct: 121 KLRGGVDVLIATPGRLLDLEHQNAVKLDGIEILVLDEADRMLDMGFIHDIRRVL-AKLPA 179

Query: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242
           RRQ L+FSAT    ++  +A +LL+ P  + +   +   + +TQH +  D    K  LL 
Sbjct: 180 RRQNLLFSATFSD-EIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDK-KRKRELLS 237

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
           +++    ++QV++FT T+   + L E+LN++ +++ A+ GN +Q  R   +  F+    +
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           +LV TD+A+RGLDI  + HV+N+++P   E+YVHR+GRTGRA   G+A+SLV   + +  
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357

Query: 363 KRVEAFLQQEI 373
           + +E  L++EI
Sbjct: 358 RDIERLLKKEI 368