Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

 Score =  259 bits (663), Expect = 9e-74
 Identities = 156/444 (35%), Positives = 234/444 (52%), Gaps = 8/444 (1%)

Query: 7   FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
           F +L LD  LL  L    F + T IQ  AIP  + GRD+L S+ TG+GKT A++LP+L  
Sbjct: 6   FSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLLPVLQH 65

Query: 67  SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALAR 126
            L      +  PR LIL PTRELA QV    R +          ITGG  + +  +  + 
Sbjct: 66  LLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHAEVFSE 125

Query: 127 GPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQT 186
               +VAT GRL  ++   +     +ETL+LDEADRMLD+GFA+++  I    + R  QT
Sbjct: 126 NQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRN-QT 184

Query: 187 LMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRILA 246
           ++FSATL+   + D A  LL +P  ++    + E K I Q +Y  D+L+HK  LL  +L 
Sbjct: 185 MLFSATLEGEAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLKHLLK 244

Query: 247 DAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKILVT 306
             +  + I+F   R     L E L    +    L G + Q +R   + +       +LV 
Sbjct: 245 QEDALRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQIKRTEGIKRLTDGRVNVLVA 304

Query: 307 TDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKRVE 366
           TDVA+RG+DIP V+HVINFDMP+  + Y+HR+GRTGRAG KG A+SLV   D+   +++ 
Sbjct: 305 TDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLLQKIG 364

Query: 367 AFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSK-KAAPRDKSFYQN 425
            ++ + ++  V+  L       +    K    P+++    +A  K K K  PR K  +++
Sbjct: 365 RYVDEPLKARVIDELR---PTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHRD 421

Query: 426 VAVGDSVFIPKKKVAPKPEVDLED 449
                ++   +K  +  PE   E+
Sbjct: 422 T---KNIGKRRKPSSATPETKTEE 442