Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., ATP-dependent RNA helicase RhlE from Escherichia coli ECRC62

 Score =  263 bits (671), Expect = 1e-74
 Identities = 145/380 (38%), Positives = 226/380 (59%), Gaps = 5/380 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   +L+ +A   +++ T IQQQAIP  + GRDL+AS++TG+GKT  F LP+L
Sbjct: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 65  HKSLKTK--AFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122
              +  +  A   +  R LIL PTRELA Q+   +R     L+  + ++ GG + N Q+ 
Sbjct: 61  QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120

Query: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182
            L  G   +VATPGRL D     ++ L+ +E LVLDEADRMLD+GF  ++RR+       
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP-A 179

Query: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242
           +RQ L+FSAT    D+  +A +LL+ P  I +   +     +TQH +  D    K  LL 
Sbjct: 180 KRQNLLFSATFSD-DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLS 237

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
            ++    ++QV++FT T+   + L E+LN++ +++ A+ GN +Q  R   +  F+    +
Sbjct: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           +LV TD+A+RGLDI  + HV+N+++P   E+YVHR+GRTGRA   G+A+SLV   + +  
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357

Query: 363 KRVEAFLQQEIQFEVLAGLE 382
           + +E  L++EI    + G E
Sbjct: 358 RDIEKLLKKEIPRIAIPGYE 377