Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., RNA helicase CrhR from Azospirillum sp. SherDot2

 Score =  283 bits (723), Expect = 1e-80
 Identities = 161/423 (38%), Positives = 239/423 (56%), Gaps = 13/423 (3%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F +LGL   +LK+L  + +   T +Q  AIP  + GRD+LA+++TG+GKT AF+LP L
Sbjct: 1   MTFSELGLHPLVLKSLEAFEYTVPTPVQLAAIPPALQGRDILATAETGTGKTAAFMLPAL 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
            ++ +     A  PR L+L PTRELAKQV    R     +      + GG  + +Q++ L
Sbjct: 61  TRTAELPLNGAATPRVLVLAPTRELAKQVTDAARKYAKFMKLNIVDVVGGMPYREQLRLL 120

Query: 125 ARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184
           +R    +V TPGRL DH+  R + L+ +E L+LDEADRMLD+GF  ++  I       R 
Sbjct: 121 SRPVDVLVCTPGRLLDHVARRRISLDEVEVLILDEADRMLDMGFLDDVETIAKCCPPTR- 179

Query: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRI 244
           QT++F+ATLD   +  +A  LL  P+R+A+        ++ Q  +  D LDHK  LL   
Sbjct: 180 QTMLFTATLDRR-MAQLAGNLLRNPERVAVE-SQATAINVEQRLHHADDLDHKRRLLQHF 237

Query: 245 LADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKIL 304
            A  E  + IIF AT+ D D L E+L+     A AL G+++QT+RN  + +      ++L
Sbjct: 238 AAQEEVGKAIIFAATKRDADTLAEELSAAGHAAAALHGDMDQTKRNRTLQRLRTGQVRLL 297

Query: 305 VTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKR 364
           V TDVA+RG+D+  +THVINFD+P+  E+YVHR+GRTGRAG  G A+S     D E+  R
Sbjct: 298 VATDVAARGIDVRDITHVINFDLPRSAEDYVHRIGRTGRAGASGVAISFAARADRETLVR 357

Query: 365 VEAFLQQEIQFEVLAGLE----------GKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKK 414
           +E + +  ++  V+ GLE          G+  G   R +     P  R  ++K P   + 
Sbjct: 358 IERYTKATLEVHVVPGLEPTRPFTTGGAGRPAGRSGRPSGGAGKPWHRNGESKGPHAPRG 417

Query: 415 AAP 417
             P
Sbjct: 418 PRP 420