Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., ATP-dependent RNA helicase RhlE from Alteromonas macleodii MIT1002

 Score =  255 bits (651), Expect = 3e-72
 Identities = 148/428 (34%), Positives = 237/428 (55%), Gaps = 15/428 (3%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   LL+ +    F   + IQ++AIP  + G+D+LA+++TG+GKT  F LP+L
Sbjct: 1   MSFTQLGLAEPLLRAIEKRGFSTPSPIQEKAIPEVLQGKDVLAAAQTGTGKTAGFGLPIL 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
            + ++ +  S  + R LIL PTRELA QV   +R+    L     ++ GG   N Q+  L
Sbjct: 61  QRLMEGQPVSGNNVRALILTPTRELAAQVEESIRAFSEFLPLKTAVVFGGVGINPQMMKL 120

Query: 125 ARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184
            +G   ++ATPGRL D     ++    LE LVLDEADRMLD+GF  +++R+      + R
Sbjct: 121 RKGVDVLIATPGRLLDLYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIKRVLKLLP-QER 179

Query: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRI 244
           Q+L+FSAT    ++  +A  +   P  I+    +   + + QH    D      AL+  +
Sbjct: 180 QSLLFSATFSD-EITALAKTITRNPVSISTAPANTTVEAVQQHLVTIDKSKKTTALI-CL 237

Query: 245 LADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKIL 304
           +   ++ QV++F+ T+   +R+ EKL ++ + + A+ GN +Q  R   +  F+    K+L
Sbjct: 238 IKQQKWEQVLVFSRTKHGANRIAEKLTRSKIPSAAIHGNKSQGARTKALADFKNGAIKVL 297

Query: 305 VTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKR 364
           V TD+A+RG+DI  +  V+N D+P    +YVHR+GRTGRAG  G A S V  ++ ++ K 
Sbjct: 298 VATDIAARGIDISELPIVVNLDLPNTAADYVHRIGRTGRAGASGQAWSFVCAEELQNLKD 357

Query: 365 VEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKK-AAPRDKSFY 423
           +E  +Q+ +  E L G E       P+Q    A P   ++K K P K KK  AP+ +S  
Sbjct: 358 IETLIQKLLPRETLEGFE-------PQQ----AVPVTTLSKPKKPKKPKKPKAPQGESGS 406

Query: 424 QNVAVGDS 431
           +    G++
Sbjct: 407 EGKRSGEN 414