Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., ATP-dependent RNA helicase from Agrobacterium fabrum C58

 Score =  255 bits (652), Expect = 2e-72
 Identities = 156/418 (37%), Positives = 223/418 (53%), Gaps = 17/418 (4%)

Query: 7   FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
           F DLGL  ++L  +A   +   T IQ  AIP  +  RD+   ++TG+GKT +FVLPML  
Sbjct: 4   FSDLGLSQKVLSAIADAGYTTPTPIQAGAIPPALEKRDICGIAQTGTGKTASFVLPMLTL 63

Query: 67  SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALAR 126
             K +A  A+ PR LIL PTRELA QV                L+ GG +F DQ + L R
Sbjct: 64  LEKGRA-RARMPRTLILEPTRELAAQVAENFEKYGKNHKLNVALLIGGVSFEDQDRKLER 122

Query: 127 GPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQT 186
           G   ++ TPGRL DH +   L + G+E LV+DEADRMLD+GF  ++ RI       R QT
Sbjct: 123 GADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKMIPFTR-QT 181

Query: 187 LMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRILA 246
           L FSAT+   ++  +A   L  P RI +   S   K +TQ      + D+++  + R L 
Sbjct: 182 LFFSATMP-PEIQKLADRFLQNPTRIEVAKPSSTAKTVTQRIVAAHNKDYEKRAVLRDLV 240

Query: 247 ---DAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKI 303
              +AE +  IIF   + D   L   L+++     AL G+++Q  R T++  F      +
Sbjct: 241 RAEEAELKNAIIFCNRKKDVADLFRSLDRHGFSVGALHGDMDQRSRTTMLQNFRDGQLTL 300

Query: 304 LVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFK 363
           LV +DVA+RGLDIP V+HV NFD+P H E+YVHR+GRTGRAG  G A +LV   D +   
Sbjct: 301 LVASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGKAFTLVTKSDAKYLD 360

Query: 364 RVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKKAAPRDKS 421
            +E  + ++I++     L G    L      P    +   N  +  +K +    RD++
Sbjct: 361 AIEKLIAEKIEW-----LSGDLSSL------PAPMESFESNSGRRGTKERSGRGRDRN 407