Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., ATP-dependent RNA helicase DeaD from Acinetobacter radioresistens SK82

 Score =  267 bits (682), Expect = 8e-76
 Identities = 156/395 (39%), Positives = 229/395 (57%), Gaps = 12/395 (3%)

Query: 7   FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
           F +  L   L + L    F   T +Q+QAIP  + G+DLL SS+TGSGKT AF+LP L+ 
Sbjct: 5   FAEFSLHESLTQALTDLGFTAPTAVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTLNA 64

Query: 67  --------SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLS-YTATLITGGENF 117
                     K +  +   P  L++ PTRELA+QV  +  +++  +       I GG  F
Sbjct: 65  LADQDTFLPFKERMRAVTQPNILVISPTRELAQQVCQDAIALVRHMKGVRIAAIMGGMPF 124

Query: 118 NDQVKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHN 177
             Q++ L +G + +VATPGRL D ++ R + L+ ++ L++DEADRMLDLGF+++L  I  
Sbjct: 125 GKQIQQL-KGAQVVVATPGRLLDLVNRRQIKLDKVDALIVDEADRMLDLGFSEDLEAISE 183

Query: 178 AAKHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHK 237
            A +R+ QTLMFSAT     +  +A  ++ +P RIAI  G   + DITQ  +  D  +HK
Sbjct: 184 LALNRK-QTLMFSATFADRIIR-LAECMMKDPMRIAIETGHSTNTDITQTLHWTDGFEHK 241

Query: 238 EALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFE 297
           + LL   L D    Q ++F +T+ DTD L E+L +     VAL G + QT RN  +    
Sbjct: 242 KKLLTHWLEDETLDQAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTVRNRRLRSIR 301

Query: 298 RAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPK 357
               KILV TDVA+RGLD+P ++HVINF +P   E+YVHR+GRTGRAG  G A++L   +
Sbjct: 302 EGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTGKAITLATYR 361

Query: 358 DWESFKRVEAFLQQEIQFEVLAGLEGKFKGLKPRQ 392
           +    + +E +L+  +    + GLE      +PR+
Sbjct: 362 ERGKIRALEDYLETRLNVSEIEGLEPSPPPARPRR 396