Pairwise Alignments

Query, 306 a.a., peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) from Escherichia coli BW25113

 Score =  224 bits (570), Expect = 3e-63
 Identities = 120/286 (41%), Positives = 178/286 (62%), Gaps = 11/286 (3%)

Query: 20  AAVFDLPIEGSSIVGNTQYHKVEKGET--LADIAKKYDIGFLALMAANRGVDPFLPQEGF 77
           A  + LP EGS +VG +    V    T  L   A +Y  G   ++ AN G D FLP+ G 
Sbjct: 21  AVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGS 80

Query: 78  VISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTP-VMQTSIS 136
            ++IP ++ILP    +GIV+N+AE+RLYY+ P+   V +FP+GIG+ GR+TP    T++ 
Sbjct: 81  QLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVE 140

Query: 137 SKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLIHGTNKDF 196
            K++ PTWTP  + R+EY  +G  LP  VPAGP+NP+G YA+   Y    Y IHGTN +F
Sbjct: 141 RKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAI---YIGRLYAIHGTNANF 197

Query: 197 GVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVALEPDRSVFIEVHEPLTRSN 256
           G+G+RVS GCIR+   DI++L+  V  G +V+II++P+K   EPD S ++EVHEPL+R+ 
Sbjct: 198 GIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNR 257

Query: 257 GV-----KKNLVVPEELSWWLQEHKISDAKARAAVLAQNGVPVEIA 297
                  K  L V   L  ++   ++   +A AA+  ++G+PV+I+
Sbjct: 258 AEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQIS 303