Pairwise Alignments

Query, 306 a.a., peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., L,D-transpeptidase family protein from Dickeya dianthicola ME23

 Score =  258 bits (658), Expect = 2e-73
 Identities = 130/281 (46%), Positives = 190/281 (67%), Gaps = 6/281 (2%)

Query: 19  NAAVFDLPIEGSSIVG-NTQYHKVEKGETLADIAKKYDIGFLALMAANRGVDPFLPQEGF 77
           +A  + LP   S ++G N  Y     G  L  IA K+ IG L ++ AN G DP+LP+ G 
Sbjct: 23  SATEYPLPPPDSRLIGENISYTVPNDGHPLEVIAAKFKIGLLGMLEANPGTDPYLPKPGS 82

Query: 78  VISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISS 137
            ++IP +++LP    EG+V+NLAELRLYYF   +  V ++P+GIG++GR+TPVM T +  
Sbjct: 83  SLTIPLQMLLPDTPREGVVVNLAELRLYYFPKGKNTVIVYPIGIGQLGRNTPVMVTRVIE 142

Query: 138 KRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLIHGTNKDFG 197
           +R  PTW P A+IR+ YK +G+ LP VVP GP+NP+G +A+RL    G Y IHGTN DFG
Sbjct: 143 RRPNPTWIPTANIRRHYKEQGVTLPAVVPGGPDNPMGLFALRLEKSGGVYSIHGTNADFG 202

Query: 198 VGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVALEPDRSVFIEVHEPLTRSNG 257
           +GMRVS+GCIR+ P+DIE L+  V  G +V+IINEP+K+ALEPD   ++E H+PL+R++ 
Sbjct: 203 IGMRVSSGCIRLRPEDIEALFNDVPVGTRVQIINEPVKIALEPDGKRYVEAHQPLSRTDK 262

Query: 258 VKKNLVVPEELSWWLQ---EHKISDAK-ARAAVLAQNGVPV 294
                 +P  LS  ++   +H  +DA+ A+ A++ ++G+PV
Sbjct: 263 DDPQ-TMPIALSQKVKAFIKHDDTDAEAAQNAIVRRSGMPV 302