Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Deoxyribodipyrimidine photo-lyase from Xanthobacter sp. DMC5

 Score =  276 bits (707), Expect = 9e-79
 Identities = 177/479 (36%), Positives = 242/479 (50%), Gaps = 25/479 (5%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIW---RRLAEL 59
           L+WFR DLR  DN AL A   +G P+AA+Y+   +     H+ P+ A   W   + L  L
Sbjct: 7   LLWFRDDLRLADNPALNALAETGAPIAALYVLDEDS---PHIRPLGAAARWWLAQSLRAL 63

Query: 60  QQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLS 119
           + +L+   +PL  +Q      A   V ++A  L A  V  N      E + D+     L+
Sbjct: 64  RADLSHHGIPLILRQ----GPATRIVPEVAAALGAATVAFNDRAGEAEGKLDRAITARLA 119

Query: 120 EQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTL--FQPPVIGKNRPVALWNV 177
            +      F    + PPG+V    G   + F+ F RA L      PP+    R   +   
Sbjct: 120 AEDRRVLHFCAHLLHPPGTVLGGSGRMPRTFSSFHRAALRERDLSPPLPAPKRLKGVTRA 179

Query: 178 PSA--LAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREG 235
           P    L      PE+  D+     T W       R +L  F  + ++ Y   RD P  E 
Sbjct: 180 PEGDTLESFALEPEKP-DWAGGLRTAWHVGEAAARQRLSAFIADGLKGYATGRDRPDLEH 238

Query: 236 TSSLSPYLAIGVLSARQCVARLYHESSMGEL-SEGAQVWLSELIWREFYQHLVAIEPNLS 294
            S LSP+L  G +S RQ    + H    GE+    A  + +EL WREF  HL+A +P+++
Sbjct: 239 VSRLSPHLRFGEMSPRQIFFAVRHAVDAGEVPGSDAAKFEAELYWREFSYHLLAEDPDIA 298

Query: 295 KSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLT 354
           + R+  +      W   + + + W  G TGYP+VDA MRQL QTGWMHNR+RM+VASFL 
Sbjct: 299 R-RNIQQSFDAFPWRECSGELKAWRRGLTGYPLVDAGMRQLWQTGWMHNRVRMVVASFLA 357

Query: 355 KDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNG 414
           K L IDWR GE +F   L+D D A N   WQW A +G D  PYFRIFNPV QGEKFDP+G
Sbjct: 358 KHLLIDWRAGEDWFWDTLVDADAANNAASWQWVAGSGLDAAPYFRIFNPVMQGEKFDPDG 417

Query: 415 DFIRRWVPELRSVSSAYIHQPWTYPAVNSV--------LYPARLVDHKQEREVTLRLYK 465
            ++R +VPEL+ + +  IHQPWT P              YP  LVDH   R+  LR ++
Sbjct: 418 TYVRTYVPELKRLPAKLIHQPWTAPQDTLAAAGIRLGHTYPKPLVDHAAARDRALRAFE 476