Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., deoxyribodipyrimidine photo-lyase from Variovorax sp. OAS795

 Score =  314 bits (805), Expect = 4e-90
 Identities = 193/485 (39%), Positives = 259/485 (53%), Gaps = 26/485 (5%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
           L+WFRRDLR  DN AL  AL S   V  +++              + + I   L EL   
Sbjct: 16  LMWFRRDLRVDDNAALYHALRSCRQVVCVFVFDRAILDPLPRIDRRVEFIRESLVELDAG 75

Query: 63  LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122
           L  L+  L  +  A    A   +  LA  L+   V ANRD E D   RD      L+  G
Sbjct: 76  LQELSGGLIVRHAA----ALDEIPALAHELDVQAVFANRDDEPDALARDAQVLGALANAG 131

Query: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWL----TLFQPPVIGKNRPVALWNVP 178
           + +  F D  V     V TK G+ + VFTP+KR+WL    + F      +    AL   P
Sbjct: 132 VTFHTFKDSTVFDRDEVLTKTGQPYTVFTPYKRSWLAKVDSFFLKSYQVRTHADALAPPP 191

Query: 179 SALAELVWHPEQ-AFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTS 237
            A    V   E+  F    + +           A   DF  +R+  Y  AR+FPA  G S
Sbjct: 192 GAYRAPVPSLEEIGFGKSNLSALEIPTGSSGAAALFEDFF-QRIDRYDAARNFPAVRGPS 250

Query: 238 SLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNL---S 294
            L  +L  G +S RQ     +  S  G+   GA  WLSELIWR+FY  ++A  P++    
Sbjct: 251 YLGVHLRFGTVSVRQLAGVAHQLSLQGDA--GAATWLSELIWRDFYFQILAHFPHVHSGG 308

Query: 295 KSRDFVEWGARLEWWND---NEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVAS 351
           +S+ F     +++W +    ++ F+ WC+G+TGYP+VDAAM Q+NQ+G+MHNRLRM+VAS
Sbjct: 309 ESKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDAAMLQINQSGYMHNRLRMVVAS 368

Query: 352 FLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
           FL KDL +DWR GERYF   L D + A+NNGGWQW +S+GCD QPYFRIFNPV+Q E+FD
Sbjct: 369 FLCKDLGLDWRRGERYFALHLNDFELASNNGGWQWASSSGCDAQPYFRIFNPVTQSERFD 428

Query: 412 PNGDFIRRWVPELRSVSSAYIHQPWTYPAVN--------SVLYPARLVDHKQEREVTLRL 463
           P G FIRR++P+L  +S+A IH PW    V            YP  +VDH + RE TL+ 
Sbjct: 429 PEGKFIRRYLPQLAGLSNAAIHAPWMASPVELEAAGIKLGENYPRPVVDHAEAREKTLQR 488

Query: 464 YKTAK 468
           Y  A+
Sbjct: 489 YGVAR 493