Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Sphingobium sp. HT1-2

 Score =  244 bits (624), Expect = 3e-69
 Identities = 175/482 (36%), Positives = 243/482 (50%), Gaps = 44/482 (9%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
           ++WFR+DLR  D  AL AA  +G PV  +YI   E   Q  +       +   LA L + 
Sbjct: 6   IIWFRQDLRLSDQAALAAAAQAG-PVIPLYILDDESPRQWAMGGASRWWLHHSLASLDER 64

Query: 63  LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQ-LAQQLLSEQ 121
           L A    L  ++       A  ++Q+AK   A  V A R +E   +  ++ +A+Q     
Sbjct: 65  LRAKGSRLILRR----GRCADVLAQVAKECGAQVVHAIRHHEPWWRNAEKGVARQ----- 115

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVPSAL 181
            I     D   +LP  +VRT  G  ++++TPF RA + L  PP   +  P  +   PS  
Sbjct: 116 -IDLRLHDGGLLLPVEAVRTGGGTPYRIYTPFSRA-VMLHMPPAPPQPAPQRI-EAPSHW 172

Query: 182 AE---------LVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPA 232
            +         L   P+ A  +P      W+   E  +  L  F  E V DY  ARD P+
Sbjct: 173 PDSDRLEGWNLLPRDPDWASGFP----ADWSPGEEGAKRYLDSFLGE-VGDYAVARDLPS 227

Query: 233 REGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEP- 291
           +EGTS LSP+L  G +S     A+++H   + +    A V+L ELIWR++  + V   P 
Sbjct: 228 QEGTSRLSPHLHFGEISP----AKVWHR--VAKAPGDATVYLKELIWRDYAHNQVWALPA 281

Query: 292 ----NLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRM 347
               N   + D + W    E   D   +  W  G+TGYPIVDA MRQL QTGWMHNR+RM
Sbjct: 282 YGSENAQPAFDAMHWRDLREARGD---WTAWKRGQTGYPIVDAGMRQLWQTGWMHNRVRM 338

Query: 348 IVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQG 407
           I ASFL K L IDWR G R+F   L+D DYA N+  WQW A +G D   + RI  P++Q 
Sbjct: 339 IAASFLIKHLLIDWRHGARWFWDTLVDADYANNSVNWQWVAGSGVDANLFTRIMAPLTQS 398

Query: 408 EKFDPNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVLYPARLVDHKQEREVTLRLYKTA 467
           +KFD   D+IR+WVPEL  +    IH P  +  V    YP + + H++ RE  L  Y+  
Sbjct: 399 DKFDA-ADYIRQWVPELAHLDDCVIHDP-DFHGVRPSSYPEKRIGHREGRERALTAYRQM 456

Query: 468 KG 469
           KG
Sbjct: 457 KG 458