Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., deoxyribodipyrimidine photo-lyase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  311 bits (797), Expect = 3e-89
 Identities = 182/470 (38%), Positives = 244/470 (51%), Gaps = 46/470 (9%)

Query: 1   MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQ-HHLAPIQADLIWRRLAEL 59
           M L WFRRDLR  DN  L  AL SG  V  ++I       +  +    +   I+  L EL
Sbjct: 1   MLLFWFRRDLRLHDNAGLFHALTSGKLVLPLFILDSAILDKLENGKDARVTFIYNTLLEL 60

Query: 60  QQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLS 119
            ++L A    L  +     +       +L +  N   +  NRDYE   + RDQ   +L  
Sbjct: 61  HRKLEAQGSTLLVRHGKPLEV----FKELMQKYNVEAIYTNRDYEPYARHRDQEIARLAQ 116

Query: 120 EQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVPS 179
           +QG+ + +F D+ ++ PG + T  G  +KV+TPFK AW   F P +       A +   +
Sbjct: 117 QQGVAFQSFKDQVIMEPGEIMTLGGTPYKVYTPFKNAWKKAFTPTL------AASYPTHT 170

Query: 180 ALAELVWHPEQAFDYPRIDSTPWA-ADFETVRAQLRDFCRERVQDYHQARDFPAREGTSS 238
                  HP+     P +    +A +D    RA   DF    +Q Y Q R+ PA+  TS 
Sbjct: 171 HFGHFYQHPKTPI--PALQDVGFALSDLLVPRA---DFSANTLQAYEQTRNLPAKNATSH 225

Query: 239 LSPYLAIGVLSARQCV-ARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSR 297
           L P+L  G +S R+ V A L H          + VWL ELIWREF+  L+   P  S + 
Sbjct: 226 LGPHLRFGTVSVREAVRAALEH----------SDVWLQELIWREFFLQLLFHFPE-SAAV 274

Query: 298 DFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDL 357
            F      + W N+ E+F+ WCEGKTG+P+VDA MR+LN TG+MHNR+RM+VASFL KDL
Sbjct: 275 SFAPKFRHIVWRNNEEEFEKWCEGKTGFPLVDAGMRELNATGFMHNRVRMVVASFLVKDL 334

Query: 358 HIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFI 417
            IDWRWGE +F  +L+D D A+N G WQW A TG D QPYFRIFNP SQ  KFDP   +I
Sbjct: 335 LIDWRWGEAFFAEKLLDYDMASNVGNWQWAAGTGADAQPYFRIFNPTSQAAKFDPEQAYI 394

Query: 418 RRWVPELRSVSSAYIHQPWTYPAVNSVLYPARLVDHKQEREVTLRLYKTA 467
           +RWVPE                   +  YP  +VDH   R+  +  YK A
Sbjct: 395 KRWVPEF-----------------GTAAYPQPMVDHSMARDRAVAAYKKA 427