Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., Deoxyribodipyrimidine photolyase from Kangiella aquimarina DSM 16071

 Score =  148 bits (374), Expect = 3e-40
 Identities = 122/470 (25%), Positives = 198/470 (42%), Gaps = 47/470 (10%)

Query: 1   MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQ 60
           + +VW +RDLR  D+  L  A +  +P   +YI  P      H +      +W+ L +++
Sbjct: 4   INIVWLKRDLRLTDHEPLQLACDRPEPFILLYIFEPSLLSDPHYSTRHWRFVWQSLCDIE 63

Query: 61  QELAALNVPLFYQQ--VADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLL 118
           Q+L      L   Q    D   A   V+ +    +  +V  NR ++     RD   ++  
Sbjct: 64  QKLKPYGGRLVITQGEALDTLEAIRNVTNITTIFSYQEVGINRTFD-----RDIKVKRWC 118

Query: 119 SEQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVP 178
               I W       V+  G+   KQ +           W  + + P+   N   A+W   
Sbjct: 119 ENHQIQWRESSYGAVIR-GARHRKQWDAH---------WKQVMRAPLAQPNLKKAIWY-- 166

Query: 179 SALAELVWHPEQAFDYPRIDSTPWAA---DFET-----VRAQLRDFCRERVQDYHQ--AR 228
                     E   + P +DS  W      F+T      +  L DF  +R + Y +  ++
Sbjct: 167 ----------EGKLNLPPVDSHRWEKPNPQFQTGGMTVAKQVLEDFFDQRGKSYSKYISK 216

Query: 229 DFPAREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVA 288
              +R   S LSPYLA G LS R+    L    +            S L W   +     
Sbjct: 217 PLASRNHCSRLSPYLAWGNLSLRETYQELLANWNRTGWRRSLSALSSRLHWHCHFIQKFE 276

Query: 289 IEPNLSKSRDFVEWGARLEWWNDNEK--FQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLR 346
            E ++      + +      ++D  K  +  W +G+TGYP+VDA MR L +TG+++ R+R
Sbjct: 277 SETDIEHRPMNIAYLDFPYRYDDTAKQDYLAWRKGETGYPLVDACMRCLRETGYINFRMR 336

Query: 347 MIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQ 406
            ++ SF    L +DWRW   Y     +D +   +    Q  A  G  G    RI+NP  Q
Sbjct: 337 AMLVSFACHHLLLDWRWISHYLAQLFLDFEPGIHYPQIQMQA--GVTGINTIRIYNPTKQ 394

Query: 407 GEKFDPNGDFIRRWVPELRSVSSAYIHQPWTY----PAVNSVLYPARLVD 452
            ++ DP+G+FI++W PELR + +  IH PW        +N + YP  +V+
Sbjct: 395 AQEHDPDGEFIKQWCPELRGLPTEIIHTPWEMSPLEKQLNPITYPDPIVE 444