Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., deoxyribodipyrimidine photo-lyase from Dickeya dianthicola ME23

 Score =  443 bits (1139), Expect = e-129
 Identities = 237/473 (50%), Positives = 290/473 (61%), Gaps = 13/473 (2%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDP-VAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQ 61
           LVWFR DLR  DN AL AA    D  V A++IATP+QW  H +AP QA  +   L  LQQ
Sbjct: 5   LVWFRHDLRLTDNLALHAACQDPDARVEAVFIATPQQWASHAMAPCQAAFLLDNLRCLQQ 64

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
            L    +PL Y+Q  DF A+   ++   +   AT +  NR YE +E+QRD+  +Q L+  
Sbjct: 65  ALGEKGIPLHYRQCDDFAASVRWLADFCRERQATHLFYNRQYEWNERQRDRQLEQALAGV 124

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLT-LFQPPVIGKNRPVALWNVPSA 180
                 FDD  +LPPGSV T  G+ +KVFTPF+ A+L  L Q  V     P A       
Sbjct: 125 SEC-RGFDDSLLLPPGSVVTGSGDMYKVFTPFRTAFLKCLQQRDVASVPTPAARRQGDIT 183

Query: 181 LAELVWHPEQAFDYPRID-STPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSL 239
           LA L       FDYP+ D    + A       +LR FCRE+V  YH+ R+ PA   TS L
Sbjct: 184 LASLA-----PFDYPQTDVHADFPAGEPAALQRLRQFCREQVMLYHEQRELPALAATSKL 238

Query: 240 SPYLAIGVLSARQCVARLY--HESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSR 297
           SPYLA+G+LS RQC  RL   H   +     GA  W +EL+WREFY+HL+   P L K +
Sbjct: 239 SPYLALGILSPRQCFNRLRMEHPDWLARSDSGAFTWFNELVWREFYRHLLVFSPTLCKHQ 298

Query: 298 DFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDL 357
            F+ W  R+ W N  ++   W  G+TGYPIVDAAMRQLNQTGWMHNRLRMI ASFL KDL
Sbjct: 299 PFIGWTRRVAWRNAPDELAAWQRGETGYPIVDAAMRQLNQTGWMHNRLRMICASFLVKDL 358

Query: 358 HIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFI 417
             DWR GERYFMS+L+DGD AANNGGWQW ASTG D  PYFRIFNP +QGE+FDP+G+FI
Sbjct: 359 LHDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPDGEFI 418

Query: 418 RRWVPELRSVSSAYIHQP--WTYPAVNSVLYPARLVDHKQEREVTLRLYKTAK 468
           RRWVPEL  +    +HQP  W       + YP  +VDHKQ R  TL  ++ AK
Sbjct: 419 RRWVPELAQIPGKAVHQPHHWAARQQRQIDYPLPIVDHKQARTRTLAAFEAAK 471