Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., deoxyribodipyrimidine photo-lyase from Dickeya dadantii 3937

 Score =  447 bits (1150), Expect = e-130
 Identities = 239/476 (50%), Positives = 293/476 (61%), Gaps = 19/476 (3%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDP-VAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQ 61
           LVWFR DLR  DN AL AA    D  V A++IATP+QW  H +AP QA  +   L  LQQ
Sbjct: 5   LVWFRHDLRLTDNLALHAACQDPDARVEAVFIATPQQWASHAMAPCQAAFLLGNLRCLQQ 64

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
           EL   ++PL Y+Q  DF A    ++   +    T++  NR YE +E+QRDQ  +Q L++ 
Sbjct: 65  ELREKSIPLHYRQCDDFAAGVRWLADFCRARQVTRLFYNRQYEWNERQRDQQLEQALTDV 124

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGK-NRPVALWN---V 177
                 FDD  +LPPGSV T  G+ +KVFTPF+ A+L   Q   +G    P A       
Sbjct: 125 TEC-RGFDDSLLLPPGSVVTGSGDMYKVFTPFRAAFLKQLQQRDVGSVPAPAARQQGDIT 183

Query: 178 PSALAELVWHPEQAFDYPRID-STPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGT 236
           P++LA         FDYP+ D    + A       +LR FCRE+V  YH+ RD PA   T
Sbjct: 184 PASLAP--------FDYPQTDVHADFPAGEPAALQRLRQFCREQVMFYHEQRDLPALAAT 235

Query: 237 SSLSPYLAIGVLSARQCVARLY--HESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLS 294
           S LSPYLA+GVLS RQC  RL   H   +     GA  W +EL+WREFY+HL+   P L 
Sbjct: 236 SKLSPYLALGVLSPRQCFNRLRMEHPDWLARSESGAFTWFNELVWREFYRHLLVFSPALC 295

Query: 295 KSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLT 354
           K + F+ W  R+ W N  ++   W  G+TGYPIVDAAMRQLNQTGWMHNRLRMI ASFL 
Sbjct: 296 KHQPFISWTRRVAWRNAPDELAAWQRGETGYPIVDAAMRQLNQTGWMHNRLRMICASFLV 355

Query: 355 KDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNG 414
           KDL IDW  GERYFMS+L+DGD AANNGGWQW ASTG D  PYFRIFNP +QGE+FDP G
Sbjct: 356 KDLLIDWCEGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPEG 415

Query: 415 DFIRRWVPELRSVSSAYIHQP--WTYPAVNSVLYPARLVDHKQEREVTLRLYKTAK 468
           +FIRRWVPEL  +    +HQP  W       + YP  +VDHKQ R  TL  ++ AK
Sbjct: 416 EFIRRWVPELAQIPGKAVHQPHEWAIRQQRQIDYPLPMVDHKQARTRTLAAFEAAK 471