Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., Deoxyribodipyrimidine photolyase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  279 bits (714), Expect = 1e-79
 Identities = 171/468 (36%), Positives = 237/468 (50%), Gaps = 48/468 (10%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQ-HHLAPIQADLIWRRLAELQQ 61
           L W RRDLR  DNTAL  A    + V  ++I       +       +   I +RL +L++
Sbjct: 6   LFWMRRDLRLEDNTALFYACQQENNVLPLFIFDTTILEELDDKKDARVAFIHQRLQQLKE 65

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
            L A    ++ +     +       QL    +   V  NRDYE     RD+     L E+
Sbjct: 66  ALEAKGFSIWVKTGKPLEI----FKQLVDENDIAAVYCNRDYEPYAISRDKAVNAFLKEK 121

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQ--PPVIGKNRPVALWNVPS 179
           GI +  F D+ +     +  + G+F+KV+TP+K AWL  F+  PP            +  
Sbjct: 122 GIDFLDFKDQVIFEKDEILNESGDFYKVYTPYKNAWLKKFKAAPPT----------PLTP 171

Query: 180 ALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSL 239
            L  L  H     D+P + +  +  D   +     D  +  ++ Y   RDFPA + TS L
Sbjct: 172 DLKRL--HQSSPADFPSLRNLGF--DETNISFPPLDIDKPLIRQYDNMRDFPAEDKTSHL 227

Query: 240 SPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSRDF 299
             +L  G LS R+            E  +    +LSEL+WREF+  ++   P +  +  F
Sbjct: 228 GIHLRFGTLSIRKLAL---------EAEKLNATFLSELVWREFFMMILYHHPQVV-TESF 277

Query: 300 VEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHI 359
            +    + W N+ E+F  WC GKTGYPIVDA MR+LN TG+MHNR+RMI ASFLTK L I
Sbjct: 278 KKKYDNIPWRNNEEEFNKWCAGKTGYPIVDAGMRELNTTGYMHNRVRMITASFLTKHLLI 337

Query: 360 DWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFIRR 419
           DWRWGE YF  +L+D + A+NNG WQW A TG D QPYFRIFNP SQ +KFD +  +I++
Sbjct: 338 DWRWGEAYFAKKLLDYELASNNGNWQWAAGTGTDAQPYFRIFNPASQVKKFDKDLAYIKK 397

Query: 420 WVPELRSVSSAYIHQPWTYPAVNSVLYPARLVDHKQEREVTLRLYKTA 467
           WVPE                   +  YPA ++DHK  RE  L  YK+A
Sbjct: 398 WVPE-----------------YGTDQYPAPMIDHKLARERALETYKSA 428