Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., Deoxyribodipyrimidine photo-lyase from Alteromonas macleodii MIT1002

 Score =  254 bits (650), Expect = 3e-72
 Identities = 165/481 (34%), Positives = 239/481 (49%), Gaps = 29/481 (6%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
           ++WFR+DLR  DN AL AA + G  +  +YI   +    +   P  A   W     L   
Sbjct: 7   IMWFRQDLRVKDNPALNAACDMGK-IVPIYIY--DDTAPNGREPGGASKWW-----LHHS 58

Query: 63  LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122
           L++LN  L              +  L K+ NA  +  NR YE  +  RD+  ++ L E  
Sbjct: 59  LSSLNKRLNGHLQIFKGDPQTLIPNLMKSFNAKGIFWNRCYEPWQINRDKTIKKTLIEHD 118

Query: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALW-----NV 177
               + +   +  P  V  K G  ++VFTP+ +      + P   K  P  +      N 
Sbjct: 119 YEAHSCNGSLLWEPMKVLKKDGTPYRVFTPYYKKGCLQVEEPRYPKAPPARITYADVDND 178

Query: 178 PSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTS 237
              L  L   P  + D+       W+   +     L DF     + Y   RD P+  GTS
Sbjct: 179 SDGLTSLDLLP--SIDWDATIEKEWSPGEDGAADNLADFIENSARKYKDGRDIPSANGTS 236

Query: 238 SLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSR 297
            LSP+L  G +S  Q    +  +    E  +  + +LSEL WREF  +L+   P L  ++
Sbjct: 237 RLSPHLHFGEVSPNQVWYAIKDKFGNSE-DKSIETYLSELGWREFSYYLLFHFPTLP-NK 294

Query: 298 DFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDL 357
           +F E   +  W  D +  + W +G TG PIVDA MR+L QTG+MHNR+RMIV SFL K+L
Sbjct: 295 NFNEKFDKFPWRTDAKALKAWQKGNTGIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKNL 354

Query: 358 HIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFI 417
            + W  GER+F   L+D D A+N+  WQW A +G D  PYFRIFNP+ QGEKFD  G+++
Sbjct: 355 LLSWHEGERWFWDTLLDADLASNSASWQWVAGSGADAAPYFRIFNPILQGEKFDKKGNYV 414

Query: 418 RRWVPELRSVSSAYIHQPWTYPAVNSVL----------YPARLVDHKQEREVTLRLYKTA 467
           R++ PEL+ +S  YIH+PW  P  +++L          YP  +VD K  R+  L  ++T 
Sbjct: 415 RKYCPELKKLSDKYIHKPWEAP--SAILKDAGIELGKEYPKPIVDLKASRQRALDAFQTL 472

Query: 468 K 468
           K
Sbjct: 473 K 473