Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., Cryptochrome DASH from Alteromonas macleodii MIT1002

 Score =  137 bits (346), Expect = 5e-37
 Identities = 121/437 (27%), Positives = 201/437 (45%), Gaps = 37/437 (8%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIA-----TPEQWHQHHLAPIQADLIWRRLA 57
           L WFR DLR  DN A++A       V  +YI      TP  +    +   +   + + L 
Sbjct: 18  LYWFRHDLRLHDNAAISALCEEVQQVTFLYILDDKAFTPTTYGFAPMGKHRHTFLLQTLV 77

Query: 58  ELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQL 117
           +L+++LA L   L   +       A  + QL K+   + +  +     DE+ +    ++ 
Sbjct: 78  DLKRQLAKLGHDLLIVK----GDPAERLVQLMKSGQYSHLGVSEHCGFDERAQLNTVKRF 133

Query: 118 LSEQGII----WSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVA 173
                +I    +  FD + +  P +++    E   VF+PF+R      +P  +  + P+ 
Sbjct: 134 FDSVTVIETPTFGLFDAQTL--PFNIK----EMPDVFSPFRRKVEKHCKP--LSVHPPME 185

Query: 174 LWNVPSALAELVWHPEQAF------DYPRIDSTPWAADFETVRAQLRDFCRE--RVQDYH 225
             ++PS     +   +++F      D P    + +          L  +  +      Y 
Sbjct: 186 --SLPSPFTPQL---DESFLFAIDTDLPSPSQSSFVGGETAALTHLNTYLFDWKAAATYK 240

Query: 226 QARD-FPAREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQ 284
             R+     + ++ LS +LA G LSAR+ + ++    +  E ++       EL+WREF+ 
Sbjct: 241 DTRNALDTWQDSTKLSAWLANGSLSAREVIRQVQQFEATVEKNDSTYWIYFELLWREFF- 299

Query: 285 HLVAIEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNR 344
           H +  +   +  R     G +    +  E F LWCEGKTGYPIVDA MRQL +TG+M NR
Sbjct: 300 HWLQCKYGANWFRFGGIQGKKPSTQHCPETFALWCEGKTGYPIVDACMRQLAETGYMSNR 359

Query: 345 LRMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPV 404
            R +VAS    +L  DWR+G  +F  +LID D  +N G W + A  G D + + R FN  
Sbjct: 360 GRQLVASCFVHELRQDWRFGAAWFEHQLIDYDVGSNWGNWLYLAGVGSDPRGH-RQFNLQ 418

Query: 405 SQGEKFDPNGDFIRRWV 421
            Q E +D +G F ++W+
Sbjct: 419 KQTEIYDSDGQFRKKWL 435