Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Deoxyribodipyrimidine photo-lyase from Acinetobacter radioresistens SK82

 Score =  373 bits (958), Expect = e-108
 Identities = 203/474 (42%), Positives = 273/474 (57%), Gaps = 12/474 (2%)

Query: 2   RLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQ 61
           +LVWFR+DLR  D++AL  A  +G P  A+   +P QW QH  A I+ DL  R+L  L++
Sbjct: 5   QLVWFRQDLRIVDHSALWHARQTG-PCIALVTLSPVQWRQHDDAVIKIDLYLRQLKVLKE 63

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
           +L  LN+P+  Q +  ++     + +  ++L+  Q+ A+ +  ++EQQRDQ  QQLL   
Sbjct: 64  QLKQLNIPIIIQTIPLWKEVPEFLLECCQSLSVQQIHAHIEAGINEQQRDQDCQQLLDTS 123

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPV------IGKNRPVALW 175
           GI  + + D+ + P GS+  + G+ ++VF  FK+A  +  +  +      I    P+ L 
Sbjct: 124 GIALTLYQDRTLFPFGSITNQNGQPYQVFGAFKKACYSRLEIALPKCYTEITAQNPITLP 183

Query: 176 NVPSALAELVWHPEQAFDYPRIDSTP--WAADFETVRAQLRDFCRERVQDYHQARDFPAR 233
            +     + V    Q  D P  +S    W A        L  F    +Q YH  RDFPA 
Sbjct: 184 ALDQ-FQQTVPDIRQLCDIPVPESIQQLWPACENHAHTLLEQFLENHIQHYHIERDFPAH 242

Query: 234 EGTSSLSPYLAIGVLSARQCVARLYHESS--MGELSEGAQVWLSELIWREFYQHLVAIEP 291
            GTS LS YL IGVLS RQC+  L+   S       EG  +WL EL+WREFYQH++ + P
Sbjct: 243 SGTSQLSAYLNIGVLSIRQCIQALFRHQSGYFVPEQEGQSIWLDELLWREFYQHILYLFP 302

Query: 292 NLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVAS 351
           N+SK   F      + W +D      W +G+TG PIVDA MRQL  TGWMHNR+RMI A 
Sbjct: 303 NVSKYLPFKANARNIPWQDDKTALTAWQQGQTGIPIVDAGMRQLLVTGWMHNRVRMITAM 362

Query: 352 FLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
           FL K+L IDWR GE++FM  LIDGD AANNGGWQWCASTG D  PYFRIFNPVSQ  KFD
Sbjct: 363 FLCKNLLIDWRQGEQWFMQHLIDGDLAANNGGWQWCASTGTDSVPYFRIFNPVSQSRKFD 422

Query: 412 PNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVLYPARLVDHKQEREVTLRLYK 465
           P G +IR W+PEL  + +  IH P+    V  + YP  +VD K  R   +  +K
Sbjct: 423 PEGQYIRTWIPELAHLDAKTIHAPYESKTVQQLDYPKPIVDLKYSRARAIDHFK 476