Pairwise Alignments

Query, 265 a.a., helix-turn-helix-type transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Transcriptional regulator, MerR family, associated with photolyase from Pseudomonas fluorescens GW456-L13

 Score =  100 bits (250), Expect = 3e-26
 Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 5/195 (2%)

Query: 4   DEKRYAIREVAEITGVKPVTLRAWQRRYNLVQPDRTEKGHRLFTDQDIEMIRQIQSWLAK 63
           DE    IREVA  TGV  VTLRAW+RRY L+ P RT KGHRLF+   ++ I+ I +WL +
Sbjct: 22  DEGWLPIREVARQTGVNAVTLRAWERRYGLIVPLRTPKGHRLFSADHVQRIQTILTWLNR 81

Query: 64  GVAIGKVGALLQSGVSESESIPQPVGQLEECETLLTALAALQRSKAEQIIATVLKEYPLS 123
           GVA+ +V  LL +  + SES+      L   +TLL A++ LQ    +  +   +  YP  
Sbjct: 82  GVAVSQVKPLLDTPQAFSESVDNDWHAL--LQTLLQAVSRLQERALDDSVNQAMALYPPR 139

Query: 124 VMQAQFVQPVTEALE-RVKGPL-RSLQIGLFRTLMLSKLAFILDAENKAAVKGKCLCISL 181
            +  Q + P+  ALE R +G     ++ G F   + SK    +   N+       L ++ 
Sbjct: 140 TLCEQLLMPLLAALEQRWQGQFGAQMERGFFCAWLRSKFGARIYHNNRQLRTAPLLLVNH 199

Query: 182 DEAGSLNAWLWALAW 196
            +   +   LW  AW
Sbjct: 200 SDL-PVEPHLWLTAW 213