Pairwise Alignments

Query, 265 a.a., helix-turn-helix-type transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., MerR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 5/189 (2%)

Query: 10  IREVAEITGVKPVTLRAWQRRYNLVQPDRTEKGHRLFTDQDIEMIRQIQSWLAKGVAIGK 69
           IREVA  TGV  VTLRAW+RRY L+ P RT KGHRLF+ + ++ I  I +WL +GV + +
Sbjct: 24  IREVARQTGVNAVTLRAWERRYGLIVPQRTPKGHRLFSAEHVQRIHTILTWLNRGVPVSQ 83

Query: 70  VGALLQSGVSESESIPQPVGQLEECETLLTALAALQRSKAEQIIATVLKEYPLSVMQAQF 129
           V  L+ S  +  +++      L   + L+ A++ L   + +      +  YP   +  Q 
Sbjct: 84  VKGLIDSAQAIPDAVENEWHSLR--QNLVQAISELTERRVDDAFNQAMALYPPRTLCEQL 141

Query: 130 VQPVTEALE-RVKGPL-RSLQIGLFRTLMLSKLAFILDAENKAAVKGKCLCISLDEAGSL 187
           + P+ + LE R +G     ++   F + + SK    +   N+       L ++  +   L
Sbjct: 142 LLPLLQELEQRWQGQFGAQMERVFFLSWLRSKFGARIYHNNRQLHGAPLLLVNQSDL-PL 200

Query: 188 NAWLWALAW 196
              LW  AW
Sbjct: 201 EPHLWLSAW 209