Pairwise Alignments

Query, 265 a.a., helix-turn-helix-type transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., helix-turn-helix-type transcriptional regulator from Erwinia amylovora T8

 Score =  117 bits (294), Expect = 2e-31
 Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 13/243 (5%)

Query: 8   YAIREVAEITGVKPVTLRAWQRRYNLVQPDRTEKGHRLFTDQDIEMIRQIQSWLAKGVAI 67
           Y+I +VAE  G+ PVTLRAWQRRY L++P RTE GHR F D+DI+ I +I+ W+  GV++
Sbjct: 4   YSIGDVAEKCGINPVTLRAWQRRYGLLKPQRTEGGHRQFDDEDIQRIEEIKRWIESGVSV 63

Query: 68  GKVGALLQSGVSESESIPQPVGQLEECETLLTALAALQRSKAEQIIATVLKEYPLSVMQA 127
           GKV ALL     E E+I Q  G +   + +++ +  ++ SK    IA++ KE+P+  +  
Sbjct: 64  GKVRALL-----EGENISQDNGIVALQDEMMSVIRLVRPSKLRVKIASLGKEFPVDTLID 118

Query: 128 QFVQPVTEALERVKGPLRSLQIGLFRTLMLSKLAFILDAENKAAVKGKCLCISLDEAGSL 187
           +   P+ + L   +   R+L        ++  ++F L    K A K   L I        
Sbjct: 119 EVFVPIRQRLGLDQNTARTL-CSFLDGALIDYISFCLTGARKKAGK-DALLIGWGITDRT 176

Query: 188 NAWLWALAWAENGHQVTLL-EAVDDIRGLLENPGLAQYQILALHAHRALPAAQQSALASL 246
             WL A   A+ G ++ LL E +   R     P L   Q + +++ + L   Q+  LA  
Sbjct: 177 RLWLEAWRLAQQGWRIDLLAEPLGSPR-----PELFPGQHIFVYSGKTLTRRQEEQLAHW 231

Query: 247 QQQ 249
           Q+Q
Sbjct: 232 QEQ 234