Pairwise Alignments

Query, 265 a.a., helix-turn-helix-type transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., DNA-binding transcriptional repressor BluR from Escherichia coli ECRC62

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 15/246 (6%)

Query: 8   YAIREVAEITGVKPVTLRAWQRRYNLVQPDRTEKGHRLFTDQDIEMIRQIQSWLAKGVAI 67
           Y+I +VAE  G+ PVTLRAWQRRY L++P R+E GHRLF ++DI+ I +I+ W++ GV +
Sbjct: 4   YSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNGVPV 63

Query: 68  GKVGALLQSGVSESESIPQPVGQLEECETLLTALAALQRSKAEQIIATVLKEYPLSVMQA 127
           GKV ALL++   ++E       +L+  E +++ L     +K    I ++ +EYP+  +  
Sbjct: 64  GKVKALLETTSQDTE---DDWSRLQ--EEMMSILRMANPAKLRARIISLGREYPVDQLIN 118

Query: 128 QFVQPVTEALERVKGPLRSLQIGLFRTLMLSKLAFILDAENKAAVKGKCLCISLDEAGSL 187
               PV + L       R +       L+      + +   K   +   +  +++E   L
Sbjct: 119 HVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARL 178

Query: 188 NAWLWALAWAENGHQVTLLEAVDDIRGLLENPGLAQYQILALHAHRALPAAQQSALASLQ 247
             WL A   + +G  +++L   D I      P L   Q L +    A P  +Q+    L 
Sbjct: 179 --WLEAWRLSLSGWHISVL--ADPIES--PRPELFPTQTLIVWTGMA-PTRRQN---ELL 228

Query: 248 QQFGEQ 253
           Q +GEQ
Sbjct: 229 QHWGEQ 234