Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 88.6 bits (218), Expect = 6e-22
 Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 12/171 (7%)

Query: 365 LQQDVFTDPLTKLHNRRWLDVKLKDLLLHET----PFAFLVVDIDHFKSINDELSHLVGD 420
           L++    DPLT L NRR+++  L   +   T    P + ++ D+DHFK  NDE  H  GD
Sbjct: 437 LREQTIRDPLTSLFNRRYMEETLALEIARATRTGSPLSLVMCDVDHFKRFNDEFGHEAGD 496

Query: 421 KAIVNVSSELASYFKFRGASCVRFGGEEFLVILENVTSDMAQMHAETYRQRIFDFPWQDV 480
             +  V++E+ S F+     C RFGGEEF +I    ++ +     E  RQ I +      
Sbjct: 497 AVLQAVATEMRSRFRDGDVVC-RFGGEEFTIIAPGTSAVVLADRVEIVRQAISELMVNQ- 554

Query: 481 LGERGL---TVSIGITLHREG-ENTQRTFYR-ADKALYRAKANGRNQVCVE 526
            G R L   T+S G+    E  E    T  + AD ALYRAK  GRN+V ++
Sbjct: 555 -GGRTLGSTTMSFGVATWEESMERDGSTLIKAADAALYRAKREGRNRVVLD 604