Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 93/328 (28%), Positives = 148/328 (45%), Gaps = 19/328 (5%)

Query: 29  VPTAVLGGVILIGTLILLMNYNHPFTQLGSQVYSTTPIV---SGVRGRVVEVPVKPNQPL 85
           V  ++LG V+L     ++   +  F       Y  T ++     V G + +V V  + P+
Sbjct: 9   VVASILGAVVLA---FVVYETSVRFFAYSGDAYVATDVIFIAPEVSGPLAKVVVGDDAPV 65

Query: 86  TQGDVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLKEAQAAVLKAIAERDKAQREY 145
             G VL  I+  PF   VA  +A+V  A++     E+ + E+ A V  A A  D A+R+ 
Sbjct: 66  AAGAVLAEIERQPFALAVAAAEAQVTLAAERIRLAEAAIDESTAMVSAARASLDNARRQQ 125

Query: 146 DRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQLL 205
            R +   Q G  + + +D  R+    A A L+ A+S    AQ  L +    E  T AQ L
Sbjct: 126 TRSESLSQTGDISAEALDMVRRDAVVAAADLQKAESLAAVAQ-TLVTVRRAEQATAAQAL 184

Query: 206 AELRKAEFDLEQTIVRAPTDGYVTQLALRPG-MMSVPLPLAPVMTFVHTEEKIYTAAFRQ 264
           A   KA ++L +T + +P  G V  L +R G   +   PLA V++ +        AA  +
Sbjct: 185 A---KASYELSRTRIVSPVKGRVAPLTVRTGDYATAGKPLAAVVSDLDWH---IVAAVDE 238

Query: 265 NSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPAIGESQIQARGAL----LGTDALRTSG 320
             L RL+PG +  F   + P +   G V  + P I  S  +  GAL    L TD +R   
Sbjct: 239 RHLARLKPGQSVLFTIGSDPWRPHWGTVRSISPGIARSAGE-DGALPYVPLSTDWIRLPR 297

Query: 321 RVFVTLRITDDLSQYHLPMGSAVEVAVY 348
           R  V + + D  ++  L  G+   V ++
Sbjct: 298 RFPVLIDMGDLPARERLYRGADARVLIW 325