Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 18/286 (6%)

Query: 31  TAVLGGVILIGTLILLMN---YNHPFTQLGSQVYST---TPIVSGVRGRVVEVPVKPNQP 84
           T  +G V+ +  L  ++    +     Q  +  Y T   T +   V G + +V V+ NQ 
Sbjct: 21  TLFIGSVLAVAVLAGIVGPWMFGSDHRQSTNDAYVTADYTVVAPKVAGFIKQVLVEDNQQ 80

Query: 85  LTQGDVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLK-------EAQAAVLKAIAE 137
           +T G +L  ID   ++A +   +A++  A   +    +TL+       +A+AAV  A AE
Sbjct: 81  VTAGQLLATIDARDYQAALDAAQAQLLVAQAQSADARATLERQDALIAQAEAAVKAAQAE 140

Query: 138 RDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALD---SEV 194
              A  E +RY R  ++GA T Q     R     A+A L  AQ+ +  A+  +D   ++V
Sbjct: 141 VAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQARARLANAQAARVAARKQVDILTAQV 200

Query: 195 GGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVMTFVHTE 254
              +  + +  A L KA+ DL  T + AP DG V + ALR G  +   P A +++ V  +
Sbjct: 201 ASADGQLKRAEAGLEKAQLDLSYTRITAPVDGMVGERALRVG--AYVNPGARLLSVVPLQ 258

Query: 255 EKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPAIG 300
           +      F++  L  +QPG           G+  +G V  + PA G
Sbjct: 259 QAYVVGNFQETQLTHVQPGQPVRISVDTFSGETLQGHVQSIAPATG 304