Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  105 bits (263), Expect = 2e-27
 Identities = 90/340 (26%), Positives = 158/340 (46%), Gaps = 17/340 (5%)

Query: 45  LLMNYNHPFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVA 104
           LL +   P+TQ         P+ + V G++  V V  NQ + QGDVLF +D   +   +A
Sbjct: 32  LLADRYTPYTQQARLQAYVVPVAAEVAGQIKRVAVGNNQEVRQGDVLFELDQEQYRIALA 91

Query: 105 RLKAKVKEASQGALGLESTLKEAQAAVLKAIAERDKAQREYDRYQR--GYQRGAFTEQQM 162
           R +A +    +      + +  AQAA++ A A   KA+++ +R +R      G  + +++
Sbjct: 92  RAEADLDTVRRQIGASTAGIDSAQAALVAAQANERKARQDAERLKRLIDEDPGTVSVRRL 151

Query: 163 DTTRQTYKAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQL---LAELRKAEFDLEQTI 219
           +  + T   A + +  A+++ E+A+     + GG     AQL    A L KA  DL +T+
Sbjct: 152 EGAQATRDQAISQVAAARAEVERAR----EQQGGAQEDNAQLRSAAANLEKARLDLARTV 207

Query: 220 VRAPTDGYVTQLALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFM 279
           VRA  +G +T   LR  +       +P+MT +   +   +A   +N+L RL+P      +
Sbjct: 208 VRADANGLITD--LRTDVGHYVGAGSPMMTLISIHDVWISADMTENNLGRLRPETPVLVV 265

Query: 280 FRALPGKVFKGEVIEVLPAIGESQIQARGAL----LGTDALRTSGRVFVTLRITDDLSQY 335
             ALPG V KG +  +   +   Q    G L       + LR++ R  V + +  D  Q 
Sbjct: 266 LDALPGTVLKGRIRSIGYGVSVGQSTPPGTLPTVQNSREWLRSAQRFPVIIELERDQLQD 325

Query: 336 H--LPMGSAVEVAVYSDSFEHVSIMRKVLIRMKSWQNYLY 373
              L +G   EV         ++++ ++ + + SW +Y Y
Sbjct: 326 KTVLRVGGQAEVMALPSEGNPLNLLGRLFMWLMSWLSYAY 365