Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., HlyD family secretion protein from Pantoea agglomerans CFBP13505 P0401

 Score =  313 bits (801), Expect = 6e-90
 Identities = 165/378 (43%), Positives = 233/378 (61%), Gaps = 2/378 (0%)

Query: 1   MDLLLILTYTALCVAVFKVFKIPLNKWTVPTAVLGGVILIGTLILLMNYNHPFTQLGSQV 60
           MDLL+IL+Y A+  AVFK+F+IP+NKWTVPTA LGGV L+  LILLMNYNHP+T L  + 
Sbjct: 1   MDLLIILSYVAIAWAVFKIFRIPVNKWTVPTAALGGVFLVSALILLMNYNHPYTSLAQKA 60

Query: 61  YSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVARLKAKVKEASQGALGL 120
               P+   V G V EV  K    + +G++LF +D   ++  V RL+A +  A      +
Sbjct: 61  VVAIPVTPQVTGVVNEVTDKKEVLIKKGEMLFTLDQTRYKVRVERLQADLSTAINNIEAM 120

Query: 121 ESTLKEAQAAVLKAIAERDKAQREYDRYQRGYQR--GAFTEQQMDTTRQTYKAAQAALEV 178
           +  L EA A      AERD+   +Y RY +G +     F+E+ +D  RQ + A  A ++ 
Sbjct: 121 KGQLSEAVAYTTHVSAERDRLFLDYQRYLKGSKAKVNPFSERDIDNARQAFLAQDALVKG 180

Query: 179 AQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVTQLALRPGMM 238
           + ++QEQ +  L+S  GGE + +A L A+L +A ++L+QT+VRAP+DGYVTQ+ +RPG  
Sbjct: 181 SLAEQEQLRSQLNSVSGGEQSQIASLRAQLAEARYNLDQTVVRAPSDGYVTQVLIRPGSY 240

Query: 239 SVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPA 298
           +  LPL PVM F+  +++   A FRQNSL RL  G  AE +F ALPG+VF G+++ VLP 
Sbjct: 241 AAALPLRPVMIFIPVQKRQIIAQFRQNSLLRLTAGDEAEVVFNALPGQVFSGKLLRVLPV 300

Query: 299 IGESQIQARGALLGTDALRTSGRVFVTLRITDDLSQYHLPMGSAVEVAVYSDSFEHVSIM 358
           +     QA+G +        S  V   + +  +     LP G   +V VYSD F HVS+M
Sbjct: 301 VPGGAYQAQGTVQSLSLASGSDGVLALIELNPNQDVDALPDGIFAQVVVYSDHFTHVSVM 360

Query: 359 RKVLIRMKSWQNYLYLDH 376
           RK+L+RM SW +YLYLDH
Sbjct: 361 RKILLRMTSWVHYLYLDH 378