Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Multidrug resistance efflux pump from Enterobacter asburiae PDN3

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 87/293 (29%), Positives = 132/293 (45%), Gaps = 27/293 (9%)

Query: 30  PTAVLGGVILIGTLILL----MNYNHPFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPL 85
           P  +LG V+++  ++ L    +  N   T           I     G V E+ V+ NQ +
Sbjct: 26  PLIILGIVVVVMVVVALVWWFLTRNEETTDDAFTDGDVVTIAPKTAGYVTELRVRDNQRV 85

Query: 86  TQGDVLFRIDPIPFEADVARLKAKVKEA------SQGALGLESTL-----KEAQAAVLKA 134
            +GD+L  IDP    A   + +A++  A      +Q  L L          EA+A VLKA
Sbjct: 86  KKGDLLVVIDPRDTAAQRDQAQAQLGLAIAQLHQAQAQLALSKVQYPAQRDEAKAQVLKA 145

Query: 135 IAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSK---QEQAQIAL- 190
            A+   AQ EY R QRG    A T+Q +D+     ++AQA L  AQ++    EQ Q+ + 
Sbjct: 146 QADLANAQAEYRR-QRGVDPRATTQQSIDSANAQLRSAQAGLASAQAQLEVAEQVQLQIR 204

Query: 191 --DSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVM 248
             ++ V      V Q  A+L  A  +L  T VRAP DG VT+  ++PG     L  A   
Sbjct: 205 QQETNVEARERQVDQAKAQLETANLNLSYTEVRAPFDGVVTKRNVQPG----TLVQAGTA 260

Query: 249 TFVHTEEKIYTAA-FRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPAIG 300
            F      ++  A F+++ L+R++PG        A P    +G V  +    G
Sbjct: 261 LFSLVSPNVWVVANFKESQLERMKPGDKVTVSVDAWPDMELEGHVDSIQQGSG 313