Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 50/260 (19%)

Query: 52  PFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVARLKAKVK 111
           P+T+ G        I   V G +  + VK NQ + +GD+LFRID  P+            
Sbjct: 45  PWTRDGKVRAEQVSITPQVSGSITTLLVKDNQFVKKGDILFRIDDTPYHI---------- 94

Query: 112 EASQGALGLESTLKEAQAAVLKAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKA 171
                       +  AQA + KA ++  KA  E +R +R   +   + + +DT     KA
Sbjct: 95  -----------AILNAQAQLAKAQSDLAKANNEANR-RRHLSQNYISAEDLDTANINVKA 142

Query: 172 AQAALEVAQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVTQL 231
            QA + VA+                         A L++A++ L QT++ AP DG+VT L
Sbjct: 143 MQANVNVAE-------------------------ATLKQAQWQLTQTVITAPVDGWVTNL 177

Query: 232 ALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGE 291
           + R G  +      P+   V +        F +  L+ ++ G  A     +   K+ +G 
Sbjct: 178 SARVG--NYATTGQPIFALVDSHSFYVVGYFEETKLRHIREGSPAAITLYSGSQKL-QGH 234

Query: 292 VIEVLPAIGESQIQARGALL 311
           V  +  AI +  ++    L+
Sbjct: 235 VSSIGRAIYDQSVETDSGLV 254