Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., Uncharacterized protein YdhJ from Escherichia coli ECRC62

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 50/260 (19%)

Query: 52  PFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVARLKAKVK 111
           P+T+ G        I   V GR+VE+ +K NQ +  GD+L  ID  PF+  +A L     
Sbjct: 4   PWTRDGKIRAEKVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQ--IAEL----- 56

Query: 112 EASQGALGLESTLKEAQAAVLKAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKA 171
                          AQA + KA ++  KA  E +R +R   +   + +++DT     KA
Sbjct: 57  --------------NAQAQLAKAQSDLAKANNEANR-RRHLSQNFISAEELDTANLNVKA 101

Query: 172 AQAALEVAQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVTQL 231
            QA++  AQ                         A L++ ++ L QT +RAP  G+VT L
Sbjct: 102 MQASVNAAQ-------------------------ATLKQTQWQLAQTEIRAPVSGWVTNL 136

Query: 232 ALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGE 291
             R G         P+   V +        F +  L+ ++ G  A+    +   K  +G 
Sbjct: 137 TTRIG--DYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYS-DNKTLRGH 193

Query: 292 VIEVLPAIGESQIQARGALL 311
           V  +  AI +  +++  +L+
Sbjct: 194 VSSIGRAIYDQSVESDSSLI 213