Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., multidrug efflux transporter periplasmic adaptor subunit MdtN from Escherichia coli ECRC62

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 21  KIPLNKWTVPTAVLGGVILIGTLILLMNYNH-PFTQLGSQVYSTTPIVSGVRGRVVEVPV 79
           K P +K+  P  ++  + L+  + ++   +  P T        T  +V  V GR+VE+ V
Sbjct: 7   KAPRSKF--PALLVVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIVELAV 64

Query: 80  KPNQPLTQGDVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLKEAQ-------AAVL 132
             NQ + QGD+LFRIDP P+EA++A+ +A +    +  +  + ++   Q       A V 
Sbjct: 65  TDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVE 124

Query: 133 KAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALDS 192
           KA A   +A     R +   + G  + + +D  R   +AA+A L     + + A     S
Sbjct: 125 KARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAA----S 180

Query: 193 EVGGENTTVAQ---LLAELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVMT 249
            V G +  VAQ   + A++   +  LE   VRAP DG V  L    G  +    + P+ T
Sbjct: 181 AVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGRVISLKTSVGQFA--STMRPIFT 238

Query: 250 FVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGEV 292
            + T      A FR+  L+ ++ G  A     +  GK F+G+V
Sbjct: 239 LIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKV 281