Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., Multidrug resistance efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  168 bits (425), Expect = 3e-46
 Identities = 125/391 (31%), Positives = 204/391 (52%), Gaps = 19/391 (4%)

Query: 1   MDLLLILTYTALCVAVFKVFKI-PLNKWTVPTAVLGGVILIGTLILLMNYNHPFTQLGSQ 59
           M++LL+L Y+ +   +F  FK+ P N  +     +  V+ I  LIL++N   P +     
Sbjct: 1   MEILLLLIYSGIVWLIFFKFKLLPWNTVSQVIVFIIPVVSIALLILILNIVAPSSHDVRV 60

Query: 60  VYSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVARLKAKV-----KEAS 114
           +     +V  V G VV+VPV+PN+ + +GD LFRIDP+PFE +V  ++AK+     K  S
Sbjct: 61  MNYNVEVVPRVTGLVVDVPVEPNEHVKKGDTLFRIDPLPFELEVKNIEAKLPGLEAKLVS 120

Query: 115 QGALG--LESTLKEAQAAVLKAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKAA 172
             A    LES L  +   +     + D A +  ++ +   Q GA ++   +      K  
Sbjct: 121 AEAFDRELESQLTTSNNHIRVINTQIDLAVKRLEQTKELAQSGAGSQFDYEQAETNLKNL 180

Query: 173 QAALEVAQSKQEQAQIALDSEVG-GENTTVAQLLAELRKAEFD-------LEQTIVRAPT 224
           +A L VA+S++ Q    L ++   GE   V++  A L +A+ D       L+QT+ RAP 
Sbjct: 181 EAQLAVAESEKSQVIQRLSAQSDEGEFAQVSEARAALEQAKSDLAMAKWRLDQTVYRAPA 240

Query: 225 DGYVTQLALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALP 284
           DG V  L LR G M+V  P+ PVM+FV  E+ +  A F QN L+R++ G  AE   R  P
Sbjct: 241 DGRVVNLQLRTGAMAVQFPIKPVMSFVEDEQWV-VALFAQNELRRVEKGNEAEIALRTHP 299

Query: 285 GKVFKGEVIEVLPAIGESQIQARGALLGTDAL-RTSGRVFVTLRITDDLSQYHLPMGSAV 343
            ++ K  V  ++ A  + Q+ A G +  T  +    GR  V L I +D   +  P G+  
Sbjct: 300 NRIIKCTVDHIVWANAQGQLTASGRIPDTKEMGHHEGRFAVRLTIDEDNDVFLAP-GAVG 358

Query: 344 EVAVYSDSFEHVSIMRKVLIRMKSWQNYLYL 374
           + A+Y++  + + ++RKV+IR+ +  ++L L
Sbjct: 359 QGAIYTEHGKLIHLIRKVIIRVGTKIDWLIL 389