Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., putative multidrug resistance protein EmrK from Acinetobacter radioresistens SK82

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 79/245 (32%), Positives = 125/245 (51%), Gaps = 30/245 (12%)

Query: 63  TTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDP-------IPFEADVARLKAKVKEASQ 115
           T  I S V G+V EV VK  Q + QGDVL RIDP          +A++A+ K +  + S 
Sbjct: 66  TAQITSMVSGQVTEVLVKDTQQVKQGDVLVRIDPRDAKIALAQAQAELAKAKRQYNQTSA 125

Query: 116 GALGLESTLK-------EAQAAVLKAIAERDKAQREYDRYQRGYQRGAFTEQQM------ 162
            +  L S +         AQA V KA A+  KAQ +Y+R ++  + GA ++++M      
Sbjct: 126 NSQSLNSQVSVRADEIASAQAQVKKAEADLAKAQADYERRRKLSETGAISKEEMSSAQTV 185

Query: 163 -DTTRQTYKAAQAALEVAQSKQEQAQIAL---DSEVGG--ENTTVAQLLAELR--KAEFD 214
            DT R +   AQA L  A++ ++ AQ  L   ++ + G  E +T   L+A+ R  +A  D
Sbjct: 186 LDTARASLTLAQAGLSQAEANRKAAQSTLAANEALIRGATERSTPDVLIAQARVEQAMLD 245

Query: 215 LEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGF 274
           LE+T V AP DG V++  ++ G      P   +M  V   +    A F+++ L +++ G 
Sbjct: 246 LERTEVHAPLDGVVSRRNVQVGQRVA--PGNSLMVVVPVAQLYVDANFKESQLAKVRTGQ 303

Query: 275 AAEFM 279
           A E +
Sbjct: 304 AVELI 308