Pairwise Alignments
Query, 1084 a.a., protease from Vibrio cholerae E7946 ATCC 55056
Subject, 440 a.a., Tol-Pal system beta propeller repeat protein TolB from Rhodanobacter sp000427505 FW510-R12
Score = 59.7 bits (143), Expect = 5e-13
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 45 ALSPDGQK--IAFTYAG--QIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100
A SPDG K +A +Y G +++++ LT S P+W+PD QSI FT+DR
Sbjct: 257 AWSPDGSKLAVALSYVGNLELFVLDLASRRETRLTNSLSIDTEPVWAPDGQSIYFTSDRS 316
Query: 101 GLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQL 137
G ++ + GG +R+++ G ++ S DG+Q+
Sbjct: 317 GRPQIYQVPASGGTPQRISFQGQSNLNADVSYDGKQI 353
Score = 56.2 bits (134), Expect = 5e-12
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 22/138 (15%)
Query: 45 ALSPDGQKIAFTYA----GQIWLVPAQGGDAVALTES---GVYSETPIWSPDSQSIAFTA 97
A SPDG+K+A+ I++ G L ES G+ + P WSPD +A
Sbjct: 212 AWSPDGRKLAYVSFESGNSSIYVQDITTGSR-QLVESHPRGI-NGAPAWSPDGSKLAVAL 269
Query: 98 DRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGS 157
G ++F+L + RLT + D ++ DGQ +YF+S R G
Sbjct: 270 SYVGNLELFVLDLASRRETRLTNSLSIDTEPVWAPDGQSIYFTSDRSG------------ 317
Query: 158 FMAQLYSVPAAGGREQRV 175
Q+Y VPA+GG QR+
Sbjct: 318 -RPQIYQVPASGGTPQRI 334
Score = 40.8 bits (94), Expect = 2e-07
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 225 KHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSFNVWQQRFDGSEPVQITDHQKLPVRFL 284
+ T++T D PVW+ DG S+Y+ S+++G ++Q G P +I+ +
Sbjct: 286 RETRLTNSLSIDTEPVWAPDGQSIYFTSDRSGRPQIYQVPASGGTPQRISFQGQ------ 339
Query: 285 SASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNA 344
++L D++Y DG+ + G ++ + R ++ D ++ APNA
Sbjct: 340 -SNLNADVSY--DGKQIAMVQGNGNVYRITIMDR--SLGDQVRFLSPGPIDESPSFAPNA 394
Query: 345 AEVAIVA----RGDVYVVSLLSGLTQRI 368
+ + A RG +Y VS + QR+
Sbjct: 395 SMLLYAATEGRRGVLYAVSADGLVRQRL 422
Score = 37.7 bits (86), Expect = 2e-06
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 24/209 (11%)
Query: 239 PVWSADGSSMYYLSEQAGSFNVWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDG 298
P WS DG + Y+S ++G+ +++ Q IT + V + G A+ DG
Sbjct: 211 PAWSPDGRKLAYVSFESGNSSIYVQ--------DITTGSRQLVESHPRGINGAPAWSPDG 262
Query: 299 EIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEVAIVA----RGD 354
+L + + + A N TE V AP+ + + R
Sbjct: 263 S--KLAVALSYVGNLELFVLDLASRRETRLTNSLSIDTEPVWAPDGQSIYFTSDRSGRPQ 320
Query: 355 VYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSS 414
+Y V G QRI+ ++ + S DG ++ +G+ N+Y+ + D +S
Sbjct: 321 IYQVPASGGTPQRISFQGQSNLNADVSYDGKQIAMV---QGNGNVYRITIMD--RSLGDQ 375
Query: 415 LDIIEEPVLTTEQDVIQPLYSPNLKRIVY 443
+ + + P ++PN ++Y
Sbjct: 376 VRFLSPGPIDE-----SPSFAPNASMLLY 399
Score = 33.9 bits (76), Expect = 3e-05
Identities = 55/302 (18%), Positives = 117/302 (38%), Gaps = 42/302 (13%)
Query: 155 QGSFMAQLYSVPAAGGREQRVLPIAISDL------AISPSHSDILYTNQPSDEQPWRKGA 208
+G+F ++ + A G + ++D ++ S +L D + +
Sbjct: 165 RGAFWTRIAYITAVGLGNHTTYSLIVADSDGYNPQVVARSKESLLTPAWSPDGRKLAYVS 224
Query: 209 LSDATRDIWQWSPLTGKHTQITTF-RGEDRNPVWSADGSSMYYLSEQAGSFNVWQQRFDG 267
I+ TG + + RG + P WS DGS + G+ ++
Sbjct: 225 FESGNSSIYVQDITTGSRQLVESHPRGINGAPAWSPDGSKLAVALSYVGNLELFVLDLAS 284
Query: 268 SEPVQITDHQKLPVRFLSASLQGDLAYGFDGE---IWRLKAGAKQAEKVPVS--IRRSAM 322
++T+ S S+ + + DG+ ++G Q +VP S +
Sbjct: 285 RRETRLTN---------SLSIDTEPVWAPDGQSIYFTSDRSGRPQIYQVPASGGTPQRIS 335
Query: 323 PDGRHNVNFNLEATEMVVAPNAAEVAIV-ARGDVYVVSLLS---GLTQRITDTPEAERDV 378
G+ N+N + V+ + ++A+V G+VY ++++ G R +
Sbjct: 336 FQGQSNLNAD-------VSYDGKQIAMVQGNGNVYRITIMDRSLGDQVRFLSPGPIDESP 388
Query: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438
SF+ + L+YA+ EG + + DG ++ + ++ ++ DV +P + P
Sbjct: 389 SFAPNASMLLYAA-TEGRRGVLYAVSADG---------LVRQRLVLSDGDVREPAWGPFR 438
Query: 439 KR 440
+R
Sbjct: 439 QR 440
Score = 33.9 bits (76), Expect = 3e-05
Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 11/140 (7%)
Query: 7 ALSSVLSLTLCAIPNLGFASSNQTED-STQARPTWLRDIALSPDGQKIAFTY----AGQI 61
ALS V +L L + + T S P W +PDGQ I FT QI
Sbjct: 268 ALSYVGNLELFVLDLASRRETRLTNSLSIDTEPVW------APDGQSIYFTSDRSGRPQI 321
Query: 62 WLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYH 121
+ VPA GG ++ G + S D + IA + + I+ G+ R
Sbjct: 322 YQVPASGGTPQRISFQGQSNLNADVSYDGKQIAMVQGNGNVYRITIMDRSLGDQVRFLSP 381
Query: 122 GAKDIPYAFSADGQQLYFSS 141
G D +F+ + L +++
Sbjct: 382 GPIDESPSFAPNASMLLYAA 401
Score = 31.2 bits (69), Expect = 2e-04
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 422 VLTTEQDVIQPLYSPNLKRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLS 478
V +++ ++ P +SP+ +++ Y +++ V DI L+++H + +
Sbjct: 201 VARSKESLLTPAWSPDGRKLAYVSFESGNSSIYVQDITTGSRQ-LVESHPR----GINGA 255
Query: 479 YQWSPDSEYIVTRDRAMSN-GDIQLLKFD-GSEAPINLSQSGFSEFAPQFSADGQWVYWL 536
WSPD + A+S G+++L D S L+ S + P ++ DGQ +Y+
Sbjct: 256 PAWSPDGSKLAV---ALSYVGNLELFVLDLASRRETRLTNSLSIDTEPVWAPDGQSIYFT 312
Query: 537 TDAKG 541
+D G
Sbjct: 313 SDRSG 317
Score = 28.9 bits (63), Expect = 9e-04
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 46 LSPDGQKIAFTYAG----QIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRYG 101
+S DG++IA +I ++ GD V G E+P ++P++ + + A
Sbjct: 346 VSYDGKQIAMVQGNGNVYRITIMDRSLGDQVRFLSPGPIDESPSFAPNASMLLYAATEGR 405
Query: 102 LGDVFILSIQGGESRRL 118
G ++ +S G +RL
Sbjct: 406 RGVLYAVSADGLVRQRL 422