Pairwise Alignments

Query, 1084 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 68.2 bits (165), Expect = 2e-15
 Identities = 84/348 (24%), Positives = 137/348 (39%), Gaps = 58/348 (16%)

Query: 8   LSSVLSLTLCAIPNLGFASSNQTEDSTQARPTWLRDIALSPDGQKIAFTYA--------- 58
           LS+ +    CA P +       T ++          +A SPDG+ + +  +         
Sbjct: 17  LSAAMVAGACAAPAIAQPKQVLTHETLWMMKRVGAPVA-SPDGKWVVYALSEPSYEKDGA 75

Query: 59  -GQIWLVPAQGGDAVA-LTESGVYSETPIWSPDSQSIAFTADRYG--LGDVFILSIQGGE 114
              +W+VPA G  A   LT +      P W+PDS+ IAF+A R G  +  +++L + GGE
Sbjct: 76  VSDLWIVPADGSAAPRRLTATKAGEGDPAWAPDSRRIAFSAKREGDDVAQIYVLDLAGGE 135

Query: 115 SRRLTYHGAKDIPYAFSADGQQLYFSSRRL-GDDKANANVKQGSFMAQLYSVPAAGGREQ 173
           +RR+T          +  DGQ + F S    G   A AN K             A  R+ 
Sbjct: 136 ARRVTSIPTGAGKPIWRPDGQAILFESAVYPGAMDAAANKK------------TAEERKA 183

Query: 174 RVLPIAISDLAISPSHSDILYTNQPSDE-------QPWRKGALSDATRDIWQWSPLTGKH 226
           R   + + +      H  I Y N   D+       QP  +GA +     + + +   G  
Sbjct: 184 RKYNMRVYE------HFPIRYWNDWLDDKRPSLWLQPLAEGAPARDILSVTKLAQADGFG 237

Query: 227 TQITTFRGEDRNPVWSADGSSMYY--------LSEQAGSFNVWQQRFDGSEPVQITDHQK 278
               +  G    PVWS DG  + +         +    +F +++   DG EPV +T    
Sbjct: 238 GNAQSDGGMTLAPVWSPDGKEIIFTATTERWNAAHARVNFGLYRMPADGGEPVLVTP--- 294

Query: 279 LPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVS-IRRSAMPDG 325
                 +    GD+ +  DG+    K  ++  E   ++ + R A P G
Sbjct: 295 ------TPGEYGDMKFTPDGKSLIFKYNSQGEEVYDLARLHRVAWPAG 336



 Score = 47.4 bits (111), Expect = 4e-09
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 43/187 (22%)

Query: 11  VLSLTLCAIPNLGFASSNQTEDSTQARPTWLRDIALSPDGQKIAFTYAGQIW-------- 62
           +LS+T  A  + GF  + Q++      P W      SPDG++I FT   + W        
Sbjct: 224 ILSVTKLAQAD-GFGGNAQSDGGMTLAPVW------SPDGKEIIFTATTERWNAAHARVN 276

Query: 63  ----LVPAQGGDAVALTES-GVYSETPIWSPDSQSIAFTADRYGLGDVFILSI------- 110
                +PA GG+ V +T + G Y +   ++PD +S+ F  +  G  +V+ L+        
Sbjct: 277 FGLYRMPADGGEPVLVTPTPGEYGDMK-FTPDGKSLIFKYNSQG-EEVYDLARLHRVAWP 334

Query: 111 QGGESRRLTYHGAKDIP-YAFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAG 169
            GG +  LT    +++  YA + D + LY +    G             M  LY VP +G
Sbjct: 335 AGGAATLLTGAFDREVDGYAVTPDSRSLYLTVPDAG-------------MENLYRVPVSG 381

Query: 170 GREQRVL 176
           G  + V+
Sbjct: 382 GTPELVI 388



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 362 SGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVND--GGKS 410
           S   +R+T T   E D +++ D  R+ ++++REG  ++ Q YV D  GG++
Sbjct: 87  SAAPRRLTATKAGEGDPAWAPDSRRIAFSAKREGD-DVAQIYVLDLAGGEA 136



 Score = 26.9 bits (58), Expect = 0.005
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 341 APNAAEVAIVAR--GD----VYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYAS 391
           AP++  +A  A+  GD    +YV+ L  G  +R+T  P       +  DG  +++ S
Sbjct: 106 APDSRRIAFSAKREGDDVAQIYVLDLAGGEARRVTSIPTGAGKPIWRPDGQAILFES 162