Pairwise Alignments

Query, 1084 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 1089 a.a., Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  315 bits (806), Expect = 2e-89
 Identities = 298/1091 (27%), Positives = 486/1091 (44%), Gaps = 103/1091 (9%)

Query: 44   IALSPD--GQKIAFTYAGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRYG 101
            IA  PD     I F+Y G IW+VP  GG A  LT S      P +SPD   +AF+    G
Sbjct: 27   IAQYPDVSDTHITFSYGGDIWIVPKTGGLANRLTTSKGTESFPKFSPDGSKVAFSGVYNG 86

Query: 102  LGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFMAQ 161
              DV+++  QGG  +RLTYHG  D    +  DG  + F+S R   +K   N        Q
Sbjct: 87   NSDVYVMPFQGGMPQRLTYHGMSDRMVDWYGDGNHILFASSR-ESEKQRYN--------Q 137

Query: 162  LYSVPAAGGREQRVLPIAISDLA-ISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWS 220
             Y V   GG  ++ LP+   +   ISP  + I YT +    + W++     AT DI+ + 
Sbjct: 138  FYKVSVDGGLPEK-LPVPYGEFGMISPDGNKIAYTPKSRAFRTWKRYKGGMAT-DIFTFD 195

Query: 221  PLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAG--SFNVWQQRFDGSEPVQITDHQK 278
              +     I+     D  P+W+AD   +Y+LS++      N++       E  QITD   
Sbjct: 196  LASNASENISNSIYNDEFPMWTAD--KIYFLSDRGAHQRNNIYSYDLATKEIAQITDFSA 253

Query: 279  LPVRFLSASLQGDLAYGFDGEIW--RLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEAT 336
              V F S   + ++ +   GEI+   L +G  +A  + VS   +A+   + NV   ++  
Sbjct: 254  YDVLFPSIG-KDEIVFTAGGEIYLLDLSSGEFEAVSIQVSSDVTALMPRKENVKRYIQNV 312

Query: 337  EMVVAPNAAEVAIVARGDVYVVSLLSGLTQRITDTP-EAERDVSFSSDGYRLIYASEREG 395
                  N A     ARG+++ V    G    +T +   AER  ++S DG  + Y S+R G
Sbjct: 313  WPSYDGNRA--VFEARGELFSVPAKDGPVINLTQSSGVAERYPAWSPDGRYVAYWSDRTG 370

Query: 396  SWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLY-SPNLKRIVYRENRNTLKVYD 454
             + L    + +GG          E+ +          LY SP+ K++ + +    + VYD
Sbjct: 371  EYELTIKDLKNGG---------AEKTLSAYGAGYRYQLYWSPDSKKVAFVDKAMDIYVYD 421

Query: 455  IEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEAPINL 514
             E+DKT  +    +L+ Y   + S  WSPDS Y+   ++ ++N    +  FD  E  ++ 
Sbjct: 422  KEKDKTTHVDKQKSLFQYGLDNFSVSWSPDSRYLAF-EKNLTNQHNAIAVFDIEEEALHQ 480

Query: 515  SQSGF-SEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYD---VYGVALNREA------- 563
              SGF S+  P F  +G+++Y LT+    RD D +   ++   VY  A    A       
Sbjct: 481  ITSGFYSDNNPVFGPEGKYLYCLTN----RDFDPVYSDFEGTWVYANATQLAAIPLLKET 536

Query: 564  --------KFNFNKTQEQLWLEEEIA----AEKNLGPGQNPPAELTVVENKGLKQRTMRM 611
                         K +EQ   EE+ +     +K+        ++   ++  GL++R + +
Sbjct: 537  ASPLAPKNDSTSVKEEEQSAKEEDKSKKSKKDKSDDADTEEDSDKVKIDWDGLERRMVVL 596

Query: 612  TPTSLN-----------IIFKHLTHDNQALIIAYQLGDSVQISEINLRSGEMTALFNRLS 660
             P++ N           +  KH T+ + +           +++  ++ + E   +   +S
Sbjct: 597  PPSAGNYSSLGAVKGKVLYLKHPTNGSDS--------HQSELAYYDVEARESKTIMGNVS 648

Query: 661  EDAALLAMASDDASLLIMGEHGIENLNVLTG---ESKFVRYEAKANFDFRAEIAYLFDHV 717
                 L    + A ++  G  GI  + +  G   E K    + +   + +AE   +F+  
Sbjct: 649  --GYRLTANGEKALVVSQGSFGI--IGIGEGKKLEDKMPTDKIEMILEPKAEWRQIFNDA 704

Query: 718  WRLTQTKFYDPQMHGVDWQQYGDLYRKHLPSIRTYSDFAELLSEMVGDLNVSHTGAFFMA 777
            WRL +  FYDP MHGVDW+   D Y K +    T  D   ++ E++G+++ SHT  +   
Sbjct: 705  WRLERDFFYDPNMHGVDWEAMRDHYGKLIDHAITREDVNYIIGELIGEISASHT--YRGG 762

Query: 778  GNSSWEEPASLG-LYYDDRYRGKGVRVKSLLPGGPADT-YQSP-------IKAGAIIYSV 828
            G++      S+G L  D   +     VK ++ G P D+  +SP       I  G  I +V
Sbjct: 763  GDTESTSSKSIGYLGIDWGEKDDAYFVKEIIRGAPWDSEARSPLDEAGVDISEGDFILAV 822

Query: 829  NGKEISDQQDIYPFLNFTQGKLTRLSVLVPGEEKAQNFTLVPITLEEESELLYEQWVEQR 888
            NG  I  ++D +       G+   L+V            +V  TL  E+ L    W+E+ 
Sbjct: 823  NGVPIDMEKDPWAAFEDLAGETVELTVNDQASLDGSKKVMVK-TLGTETRLRNLAWIEEN 881

Query: 889  RALVETLSDGRLGYVHLAAMDAASFEQMQNDMFGLEKDKLGLVVDVRFNAGGWLHDQVME 948
            R  VE  +DG++GY+++ +      +++   MF  + DK GL++D RFN GG + D+ +E
Sbjct: 882  RKRVEEATDGKIGYIYVPSTGYDGQQELAR-MFYAQFDKEGLIIDERFNNGGQIPDRFVE 940

Query: 949  ILSGTRHSVMQTRDGYVVSSFPERRWAKPSIMLANADSYSDGSIVPYFYQKEGLGKLVGE 1008
            +L+    +    RDG     +P+     P +ML N  S S G   P +++K GLG L+G 
Sbjct: 941  LLNRKPLAFWAVRDG-ETWQWPQVANFGPKVMLINGWSGSGGDAFPDYFRKAGLGPLIGT 999

Query: 1009 RVPGTGTAVIWEQQQEPGLIYGVPQLGIKDEQGRWF-ENQEIIPDILVYNDPESVVAGED 1067
            R  G    +        G    VP   + D  G WF E   + PDI V  DP ++  G D
Sbjct: 1000 RTWGGLIGISGAPSLIDGGSVTVPTFRMFDPSGEWFKEGHGVDPDIEVAEDPTALANGTD 1059

Query: 1068 RQLAAAVEALL 1078
             QL  A+E  L
Sbjct: 1060 PQLEKAIEETL 1070



 Score = 54.7 bits (130), Expect = 4e-11
 Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 2/86 (2%)

Query: 40  WLRDIALSPDGQKIAFTYAGQIWLVPAQGGDAVALTE-SGVYSETPIWSPDSQSIAFTAD 98
           +++++  S DG +  F   G+++ VPA+ G  + LT+ SGV    P WSPD + +A+ +D
Sbjct: 308 YIQNVWPSYDGNRAVFEARGELFSVPAKDGPVINLTQSSGVAERYPAWSPDGRYVAYWSD 367

Query: 99  RYGLGDVFILSIQ-GGESRRLTYHGA 123
           R G  ++ I  ++ GG  + L+ +GA
Sbjct: 368 RTGEYELTIKDLKNGGAEKTLSAYGA 393