Pairwise Alignments

Query, 193 a.a., SCO family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center from Sphingobium sp. HT1-2

 Score = 95.1 bits (235), Expect = 8e-25
 Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 5/161 (3%)

Query: 29  LAAQVTTPLTLSGDNQQAVAIFDQADPRIRIVYFGFTRCPDVCPTSLAMLSAALNQVDDK 88
           + A++  P TL+  + + V  +D    + RIVYFG+T CPDVCP  L  +  A +  +  
Sbjct: 38  VGARIGAPFTLTDQDGKTVH-WDDYKGQYRIVYFGYTYCPDVCPVDLQRIMQAFSAFEKA 96

Query: 89  TKAQ---LRPMFISLDPERDDAKLAAQYAHYFHPMIEGLSGSVATTNQIAQKYGVIFRKT 145
             A+   ++P+FIS+DP+RD   +   Y   FHP + GL+G+     ++A+ + V++   
Sbjct: 97  APARAAKVQPIFISVDPKRDTPAVLKPYVAAFHPRLVGLTGTPEQIAKVAKDFVVLY-NA 155

Query: 146 ELPNSELKYTLDHSSYFYFLQPDGTLINKVPHTQDPTPIVD 186
           E P     Y + HS   Y   PDG  I  VP     TP VD
Sbjct: 156 EKPEGASDYLVSHSRTPYLFGPDGKPIALVPVDDPGTPDVD 196