Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., glutamate:protein symporter from Pseudomonas simiae WCS417

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 93/410 (22%), Positives = 186/410 (45%), Gaps = 34/410 (8%)

Query: 15  LVLQILAGILLGAAMATFSPEYAQKVGLI----GNLFVGALKAVA-PVLVFILVA--SSI 67
           +++ ++ GI +GA +  FS E A  +  +    G++F+  +K +  P+++  L+   + +
Sbjct: 12  ILIGLVLGIAIGAVLNHFSAEKAWWISNVLQPAGDIFIRLIKMIVIPIVISSLIVGIAGV 71

Query: 68  ANQKKNQHTYMRPIVVLYLFGTFSAALTAVILSFLFPT---------TLVLATGAEGATP 118
            + KK     ++ I+   +  T +  +  ++ +   P          T+ ++     A  
Sbjct: 72  GDAKKLGRIGVKTILYFEIVTTIAIVVGLLLANLFHPGAGIDMSTLGTVDISKYTATAAE 131

Query: 119 PQGIAEVLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLALHHSSSTTK----AVFEDL 174
            Q     + T+L  +  N  +A+     + I+ + V  GL L       +     +F+ +
Sbjct: 132 VQHEHAFIETILNLIPSNIFAAVARGEMLPIIFFSVLFGLGLSSLKPELREPLVTMFQGV 191

Query: 175 SHGISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMI 234
           S  + ++   I++ AP G+F L+A T A  GF +L   A+L+ ++  A+ F A V+  +I
Sbjct: 192 SESMFKVTHMIMKYAPIGVFALIAVTVANFGFASLLPLAKLVILVYVAILFFAFVILGLI 251

Query: 235 VYYKIRRNPFPLV--LQCLRESGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIPLG 292
                R   F +V  ++  ++  V A+ T SS   +P  +   E     +   S  +P G
Sbjct: 252 A----RLFGFSVVKLMRIFKDELVLAYSTASSETVLPRVIEKMEAYGAPKAICSFVVPTG 307

Query: 293 ATINMAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLA 352
            + N+ G+ +  ++  +      GI++ +   L+L +   V++ G +GV G S +++   
Sbjct: 308 YSFNLDGSTLYQSIAAIFIAQLYGIDLSVGQQLMLVLTLMVTSKGIAGVPGVSFVVLLAT 367

Query: 353 CGLFGISNDIAMQVVAVGFIIGV--IQDSAETALNSSTDALFTAAVCQAE 400
            G  GI       +  + FI GV  I D A TALN   +AL    + + E
Sbjct: 368 LGSVGI------PLEGLAFIAGVDRIMDMARTALNVIGNALAVLVISRWE 411



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 26/113 (23%), Positives = 55/113 (48%), Gaps = 8/113 (7%)

Query: 4   NSFLARLVRGNLVLQILAGILLGAAMATFSPEYAQKV-----GLIGNLF--VGALKAVAP 56
           ++  A + RG ++  I   +L G  +++  PE  + +     G+  ++F     +   AP
Sbjct: 148 SNIFAAVARGEMLPIIFFSVLFGLGLSSLKPELREPLVTMFQGVSESMFKVTHMIMKYAP 207

Query: 57  VLVFILVASSIANQKKNQHTYMRPIVVL-YLFGTFSAALTAVILSFLFPTTLV 108
           + VF L+A ++AN        +  +V+L Y+   F A +   +++ LF  ++V
Sbjct: 208 IGVFALIAVTVANFGFASLLPLAKLVILVYVAILFFAFVILGLIARLFGFSVV 260