Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., sodium:dicarboxylate symporter from Pseudomonas simiae WCS417

 Score =  104 bits (260), Expect = 4e-27
 Identities = 100/408 (24%), Positives = 184/408 (45%), Gaps = 30/408 (7%)

Query: 15  LVLQILAGILLGAAMATFSPEYAQKVGLI--------GNLFVGALKAVAPVLVFILVASS 66
           LV QI+ G+L G A+     +  +    +        G++F+  +K +   +VF  +   
Sbjct: 8   LVWQIMIGLLAGIAIGALLHQLPESRPWLVDNLLQPAGDIFIKLMKMIVVPIVFACMVVG 67

Query: 67  IANQ---KKNQHTYMRPIVVLYLFGTFSAALTAVILSFLFPT--TLVLATGAEGATPP-- 119
           IA     K       R +   +   T +  +  V+ + L P   T + +  A   T P  
Sbjct: 68  IAGHGDGKSLGRIGARSLGYFFCITTLAIIVGLVLGNLLKPGAGTELSSLHAASITLPTS 127

Query: 120 QGIAEVLNTLLFKLV-DNPVSALMNANYIGILAWGVGLGLALHHSSSTTK----AVFEDL 174
            G    L  ++  ++ DN +SA+   + + +L + V  GL +    +  K    A+   +
Sbjct: 128 SGAGHSLGQIIVGIIPDNVISAMAQGSLLSVLFFAVMFGLGVARLPAERKDPVIALLRGV 187

Query: 175 SHGISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMI 234
           S  + ++   I+  +P G+FG++A T A  GF +L   A+L+ V   ++AF  LVV  ++
Sbjct: 188 SDAMFKVTSMIMAYSPIGVFGMIAVTVANFGFGSLLPLAKLIMVSYVSIAFFVLVVLNLV 247

Query: 235 VYYKIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIPLGAT 294
                  N F L ++ +++  + AF T SSA+ +P  M   E   +     S  +P+G +
Sbjct: 248 ARL-CGINLFAL-MRHIKDELILAFSTASSASVMPQLMKKLETYGVSPSLVSFVVPVGYS 305

Query: 295 INMAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACG 354
            N+ GA++ + + TL      GI++ L    LL V   +++ GA+GV G   +++     
Sbjct: 306 FNLDGASLFLGIGTLFVAQLYGIDLSLGDQALLVVTMVLTSKGAAGVPGFMFVILSATLA 365

Query: 355 LFGISNDIAMQVVAVGFIIGV--IQDSAETALNSSTDALFTAAVCQAE 400
             G      + +  + FI GV  + +   TALN   +AL    + + E
Sbjct: 366 SAG------LPLEGIAFIAGVYRLMEMPTTALNVLGNALAPLVIAKWE 407