Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

 Score =  117 bits (293), Expect = 7e-31
 Identities = 97/382 (25%), Positives = 185/382 (48%), Gaps = 33/382 (8%)

Query: 14  NLVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASSIANQ--- 70
           ++ LQ++ G++LG       PE++ ++  +G+ F+  +K +  ++VF +V S I+     
Sbjct: 8   SIFLQVVIGLMLGIICGLTLPEFSSQLKPLGDGFIKLIKMLIGLIVFCVVVSGISGAGDL 67

Query: 71  KKNQHTYMRPIVVLYLFGTFSAALTAVILSFLFPTTLVLATGA-------------EGAT 117
           KK     ++ ++   +  T      A+++  +   +  + TGA             E A 
Sbjct: 68  KKVGRIGLKSVIYFEILTT-----VALVIGLVMAFSTGIGTGANIHLEQLSSAGLNELAD 122

Query: 118 PPQGIAEVLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLALH---HSSSTTKAVFEDL 174
             Q I      L+  + ++ + A  + N + +L + V  G AL+    ++S    +  +L
Sbjct: 123 KGQHIRGTSQFLMDLIPNSVIGAFADNNVLQVLLFSVLFGSALNLVGEAASGISRLINEL 182

Query: 175 SHGISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVL-LGAMAFIALVVNPM 233
           SH I +I+  I+RLAP G+FG +A T +T G D+L     L+ +  L   AF+ L++  +
Sbjct: 183 SHIIFRIMGMIVRLAPIGVFGAIAFTTSTYGLDSLQHLGSLVGLFYLTCFAFVGLILGLV 242

Query: 234 IVYYKIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIPLGA 293
           +    +R  P   +L+ LRE  +    T SS A +P  M   E L +   T  + IP G 
Sbjct: 243 MRLSGLRMLP---LLKYLREELLIVMGTASSDAVLPQIMRKLEHLGIGSSTVGLVIPTGY 299

Query: 294 TINMAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLAC 353
           + N+ G +I +T+  +   +  G  + +   L + +V+ +++ GA G+ G +L++  LA 
Sbjct: 300 SFNLDGFSIYLTLAIVFIANATGTPLSMTDLLTILLVSLITSKGAHGIPGSALVI--LAA 357

Query: 354 GLFGISNDIAMQVVAVGFIIGV 375
            L  I    A+ VV +  ++ V
Sbjct: 358 TLTAIP---AIPVVGLVLVLAV 376