Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., sodium:dicarboxylate symporter from Pseudomonas simiae WCS417

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 96/425 (22%), Positives = 170/425 (40%), Gaps = 48/425 (11%)

Query: 14  NLVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASSIANQ--- 70
           +L  Q++A + LG A    +PE A    ++G++F+  +K     LVF  V   IA+    
Sbjct: 13  DLTFQVIAAMFLGIAFGFLAPELAAGFKILGDIFLKLIKTAVAPLVFFTVVHGIASAGDI 72

Query: 71  KKNQHTYMRPIVVLYLFGTFSAALTAVILSFLFPTTLVLATGAEGATPPQGIAEVLNTLL 130
           K+     +R ++   +  T      A+ +  L+   L + +G   A P    A   +  +
Sbjct: 73  KRVGKVGLRALIYFEVVSTI-----ALAIGLLWGNLLQIGSGMHDAHPSSAAATAASAAV 127

Query: 131 FK--------------LVDNPVSALMNANYIGILAWGVGLGLALHHSSSTTKAVFED--- 173
            K                DN V A      + +L   V  G AL       + V ED   
Sbjct: 128 AKGHAPASTLDFIYGIFPDNFVGAFAGGQLLQVLVISVLFGFALLALKPERREVIEDGLN 187

Query: 174 -LSHGISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNP 232
            +S    + +  I++ AP G FG VA    + G   L   A L+ +    +AF   VV  
Sbjct: 188 RISECFFEFINLIMKFAPLGAFGSVAYAVGSNGTAVLMSLANLVLMFYVGIAFFICVVLG 247

Query: 233 MIVYYKIRRNPFPL--VLQCLRESGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIP 290
            +     R + F L   L  +++       T SS + +P  +   EK    + +  + +P
Sbjct: 248 AV----CRLSGFSLWRFLTYIKDEIFIVLGTASSESALPRLLQKLEKFGCSKQSVGLVLP 303

Query: 291 LGATINMAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIP 350
            G   N+ G +I +++  L   +  G+ +     L +  +  V++ GA+ V+GGS ++  
Sbjct: 304 TGYAFNLDGTSIYMSLCVLFIANAYGVPLSWEQQLGIIAIMLVTSKGAAAVSGGSFVVFA 363

Query: 351 ---LACG---------LFGISNDIAMQVVAVGFIIGVIQDSAETALNSSTDALFTAAVCQ 398
               A G         LFG+   ++M +         I +S  T + S     F+    Q
Sbjct: 364 ATVTAIGVLPAEGLALLFGVYRFMSMAIAT----CNTIGNSVATVVVSKWSGEFSQQTAQ 419

Query: 399 AEHEK 403
            E+++
Sbjct: 420 DEYQR 424