Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 1e-30
 Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 40/415 (9%)

Query: 15  LVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASSIANQKKNQ 74
           +V+ +LAG  +GAAM   +  +A     +G +F+  +K +   LV + + S  A    + 
Sbjct: 17  VVIAMLAGTAVGAAMGHDATLFAP----LGAIFINLIKMLVIPLVAVALISGAAGLGDSH 72

Query: 75  HTYMRPIVVLYLFGTFSAALTAV--ILSFLF-PTTLVLATGAEGATPPQGIAE-----VL 126
                  V L  F   SAA  A+  I+  LF P   V  +G E     +  A+       
Sbjct: 73  SAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAAQGELPTFW 132

Query: 127 NTLLFKLVDNPVSALMNANYIGILAWGVGLGLALHHSSSTTKAVFEDLSHGISQIV---- 182
            T++  +  N   +L  AN + IL + + LG+A+   S   K   + + + ++ IV    
Sbjct: 133 ATIIGMIPTNVFQSLNEANILQILVFCLFLGIAI---SKQAKEKRDPVINAVNTIVDAMV 189

Query: 183 ---RFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIV--YY 237
                ++ +AP G+FGL+A    T GF AL    +L  V + A+A    V  P+++  + 
Sbjct: 190 WMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFS 249

Query: 238 KIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCEK-LKLDEDTYSVSIPLGATIN 296
           K     F   +Q +++    A  T SS A +PV M   +  L +   T S  +PLGATIN
Sbjct: 250 KTSAKKF---IQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATIN 306

Query: 297 MAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLF 356
           M+G AI   ++ +       I++ +   + + V A + A G +GV G S L++ +     
Sbjct: 307 MSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVL---- 362

Query: 357 GISNDIAMQVVAVGFIIGVIQDSAETALNSSTDALFTAAV-------CQAEHEKR 404
            +S  I ++ + + F +  I D   TALN + DA     V         AE EKR
Sbjct: 363 -LSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEEAAAELEKR 416