Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., C4-dicarboxylate transport protein from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 2e-27
 Identities = 88/356 (24%), Positives = 170/356 (47%), Gaps = 28/356 (7%)

Query: 14  NLVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASSIANQ--- 70
           ++ LQ++ G+ LG A     P+ + ++  +G+ F+  +K +  ++VF +V S I+     
Sbjct: 8   SIFLQVVLGLALGIACGLSFPDLSLQLKPLGDGFIKLIKMLIGLIVFCVVVSGISGAGDL 67

Query: 71  KKNQHTYMRPIVVLYLFGTFSAALTAVILSFLFPTTLVLATGAE------GATPPQGIAE 124
           KK     ++ ++   +  T      A+++  +F  T  + +GA        A    G+AE
Sbjct: 68  KKVGRIGLKSVIYFEVLTTL-----ALVIGLVFAFTSGIGSGANIHLDQLSAADANGLAE 122

Query: 125 V------LNTLLFKLVDNPV-SALMNANYIGILAWGVGLGLALH---HSSSTTKAVFEDL 174
                         L+   V  A  + N + +L + V  G AL+    S++    +  +L
Sbjct: 123 RGQHIHGATAFFMDLIPTSVIGAFADNNILQVLLFSVLFGSALNLVGDSAAGISRLINEL 182

Query: 175 SHGISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVL-LGAMAFIALVVNPM 233
           SH I +I+  I+RLAP G+FG +A T +  G  +L     L+A+  L    F+ +V+  +
Sbjct: 183 SHVIFRIMGMIVRLAPIGVFGAIAFTTSKYGLASLQHLGGLVALFYLTCAGFVLIVLGTV 242

Query: 234 IVYYKIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIPLGA 293
           +    ++  P   +++ LRE       T SS A +P  M   E L +   T  + IP G 
Sbjct: 243 MRLSGLKLLP---LIKYLREELTIVLGTASSDAVLPQIMRKLEHLGIGSSTVGLVIPTGY 299

Query: 294 TINMAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLI 349
           + N+ G +I +T+  +   +  G  +++   L + +V+ V++ GA G+ G +L+++
Sbjct: 300 SFNLDGFSIYLTLAIVFIANATGTPLEMTDLLTILLVSLVTSKGAHGIPGSALVIL 355