Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 72.8 bits (177), Expect = 8e-18
 Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 4/190 (2%)

Query: 27  LPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSAYFGGNGHIATVNDA 86
           +P   +++ +L      PD D   +++ I+ D  L+  LL++ NS+YFG +  IA++  A
Sbjct: 19  VPPQPQIMVDLQMEQYMPDPDLEVIARLISQDPGLSGALLKIVNSSYFGLSNKIASIQRA 78

Query: 87  IIRVGIESVRTLVVASVLSSTFPKIETLDLNDYWTNTFETALIASKIAEQVGLDK-SETF 145
           +  +G  S+  L+ A  +         + LN +W    + A+    +A++ G     E +
Sbjct: 79  VNLLGSRSIINLINALSIKGEMSDDTIVTLNRFWDTAQDVAMTCLTLAKRTGAQAVDEAY 138

Query: 146 TTGVLHNIGELMIHTLMPTEASLIQQKIAQ-GMDP--LSAQEEVLGISAPRIGAMLAKEW 202
             G+ H+ G  ++    P   S+++Q  A  G D   +  +      +   +G   AK W
Sbjct: 139 ALGLFHDCGVPLMLKRFPNYMSVLEQAYANAGPDSRVVDTENNAFNTNHAVVGYYTAKSW 198

Query: 203 KFPSEMVDAI 212
           + P  + DAI
Sbjct: 199 RLPEHVTDAI 208