Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 41.2 bits (95), Expect = 4e-08
 Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 21/174 (12%)

Query: 44  PD-VDFHQLSKKITLDQILTARLLRMANSAYFGGNGHIATVNDAIIRVGIESVRTLVVAS 102
           PD +D  +L  ++ +D  +TA L+  ANSA   G   + T+  A+ ++       L++  
Sbjct: 179 PDGLDLKRLEDQVRMDPQITAVLIAAANSAGHHGTP-VQTLPAALHKLVPGQSMNLILGL 237

Query: 103 VLSSTF----PKIETLDLNDYWTNTFETALIASKIAEQVGLDKSETFTTGVLHNIGELMI 158
            L        P +       +W  + +TA  A ++A  + LD    ++ G+LH +G+L +
Sbjct: 238 ALKHNVVLGDPALVAY-AERHWQLSLDTADYARRLARMLELDHERCYSAGILHRLGDLAL 296

Query: 159 HTLMPTEASLIQQKIAQGMDPLSAQEEVLGISAPRIGA----MLAKEWKFPSEM 208
              +        +   QG   L   +E +G S    GA     L   W+ P E+
Sbjct: 297 LRCL--------ENWRQGGGAL--DDEAIGESLYTFGAAYGSALRTRWRLPLEL 340