Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 18/207 (8%)

Query: 27  LPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSAYFGGNGHIATVNDA 86
           LP L +V   +   A  P++    LSK I  D  L+ARL+++ NS        +  ++ A
Sbjct: 23  LPTLPEVALNIRQAAEDPEISISHLSKVIGRDTALSARLIKVVNSPLLRATQEVTDLHTA 82

Query: 87  IIRVGIESVRTLVVASVLSSTF---PKIETLDLNDYWTNTFETALIASKIAEQVG-LDKS 142
           I R+G      L +  V+   F     +    + D W  + E A ++  +      L   
Sbjct: 83  ITRLGTNYSSNLAIGLVMEQIFHARSDVVEQKMRDVWRRSLEVAGVSYALCRSHSQLKPD 142

Query: 143 ETFTTGVLHNIGELMIHTLMPTEASLIQQKIAQGMDPLSAQEEVLGISAPRIGAMLAKEW 202
           +    G++H IG L I T       L+        DP+S    +  I  P +G  L   W
Sbjct: 143 QAALGGLVHQIGVLPILTYAEDHYELL-------ADPVSLNHVIESIH-PLLGDKLLGVW 194

Query: 203 KFPSEMVDAI--KHFDEPREAEISPKL 227
            FP EM+  +  ++ D  R+   SPKL
Sbjct: 195 DFP-EMLAKLPGQYLDLERD---SPKL 217