Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  165 bits (418), Expect = 5e-45
 Identities = 105/358 (29%), Positives = 173/358 (48%), Gaps = 2/358 (0%)

Query: 163 SQLRNQAFMLSIGFLLVTLIA--IYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFR 220
           +Q +   F ++I  LL+  I   + WL+   +  PL  +  + + +A G  DL+ R+   
Sbjct: 352 AQRKTDIFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSD 411

Query: 221 KDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISN 280
           + +ELG +AN  + F+ K++     +   + +V+D S        R    +H Q  EI  
Sbjct: 412 RADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQ 471

Query: 281 SVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKT 340
                H+   + + V  +   A+++   A  ++      +R+  T    L E+       
Sbjct: 472 VATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSV 531

Query: 341 ATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKT 400
              L    E +  IL  IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+KT
Sbjct: 532 VQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKT 591

Query: 401 SASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTN 460
             +T +++T++ QL   +R+++  ME+S       V      +  ++     V+  N  N
Sbjct: 592 QKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMN 651

Query: 461 QNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLKQ 518
                 +E+Q+ + E +   +  +   A E+   +   S  S +L + A Q R  + Q
Sbjct: 652 TQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQ 709